Protein–RNA interactions for Protein: O88870

Best1, Bestrophin-1, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Best1O88870 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC15.7■□□□□ 0.1
Best1O88870 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Best1O88870 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Best1O88870 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC15.7■□□□□ 0.1
Best1O88870 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC15.7■□□□□ 0.1
Best1O88870 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Best1O88870 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC15.7■□□□□ 0.1
Best1O88870 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC15.7■□□□□ 0.1
Best1O88870 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Best1O88870 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC15.7■□□□□ 0.1
Best1O88870 Gm9172-201ENSMUST00000212092 954 ntBASIC15.7■□□□□ 0.1
Best1O88870 AC160338.1-201ENSMUST00000214232 705 ntBASIC15.7■□□□□ 0.1
Best1O88870 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Best1O88870 Rps4l-201ENSMUST00000071745 943 ntBASIC15.7■□□□□ 0.1
Best1O88870 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Best1O88870 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Best1O88870 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Best1O88870 AC154231.1-201ENSMUST00000220564 2175 ntBASIC15.7■□□□□ 0.1
Best1O88870 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Best1O88870 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Best1O88870 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Best1O88870 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Best1O88870 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Best1O88870 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Best1O88870 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC15.69■□□□□ 0.1
Best1O88870 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Best1O88870 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Best1O88870 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Best1O88870 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC15.69■□□□□ 0.1
Best1O88870 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Best1O88870 Gm25406-201ENSMUST00000157599 105 ntBASIC15.69■□□□□ 0.1
Best1O88870 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC15.69■□□□□ 0.1
Best1O88870 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Best1O88870 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC15.69■□□□□ 0.1
Best1O88870 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC15.69■□□□□ 0.1
Best1O88870 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Best1O88870 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Best1O88870 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC15.69■□□□□ 0.1
Best1O88870 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Best1O88870 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC15.69■□□□□ 0.1
Best1O88870 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Best1O88870 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Best1O88870 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Best1O88870 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Best1O88870 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Best1O88870 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Best1O88870 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Best1O88870 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Best1O88870 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Best1O88870 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Best1O88870 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Best1O88870 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Best1O88870 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Best1O88870 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Best1O88870 Gm5864-201ENSMUST00000202263 970 ntBASIC15.68■□□□□ 0.1
Best1O88870 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC15.68■□□□□ 0.1
Best1O88870 Rbfox2-207ENSMUST00000227533 1041 ntBASIC15.68■□□□□ 0.1
Best1O88870 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Best1O88870 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC15.68■□□□□ 0.1
Best1O88870 AC121598.2-201ENSMUST00000228376 2325 ntBASIC15.68■□□□□ 0.1
Best1O88870 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC15.68■□□□□ 0.1
Best1O88870 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Best1O88870 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Best1O88870 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Best1O88870 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Best1O88870 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Best1O88870 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Best1O88870 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Best1O88870 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Best1O88870 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Best1O88870 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Best1O88870 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Best1O88870 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Best1O88870 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Best1O88870 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC15.67■□□□□ 0.1
Best1O88870 Gm12497-201ENSMUST00000138778 237 ntBASIC15.67■□□□□ 0.1
Best1O88870 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC15.67■□□□□ 0.1
Best1O88870 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Best1O88870 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC15.67■□□□□ 0.1
Best1O88870 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC15.67■□□□□ 0.1
Best1O88870 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Best1O88870 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Best1O88870 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
Best1O88870 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Best1O88870 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC15.67■□□□□ 0.1
Best1O88870 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Best1O88870 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Best1O88870 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Best1O88870 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Best1O88870 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Best1O88870 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC15.66■□□□□ 0.1
Best1O88870 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Best1O88870 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC15.66■□□□□ 0.1
Best1O88870 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC15.66■□□□□ 0.1
Best1O88870 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC15.66■□□□□ 0.1
Best1O88870 Gm13884-201ENSMUST00000118103 829 ntBASIC15.66■□□□□ 0.1
Best1O88870 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC15.66■□□□□ 0.1
Best1O88870 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC15.66■□□□□ 0.1
Best1O88870 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Best1O88870 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms