Protein–RNA interactions for Protein: O88627

Slc28a2, Sodium/nucleoside cotransporter 2, mousemouse

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc28a2O88627 Mir5122-201ENSMUST00000175004 89 ntBASIC14.58□□□□□ -0.08
Slc28a2O88627 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC14.58□□□□□ -0.08
Slc28a2O88627 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Slc28a2O88627 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC14.58□□□□□ -0.08
Slc28a2O88627 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC14.58□□□□□ -0.08
Slc28a2O88627 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Slc28a2O88627 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC14.58□□□□□ -0.08
Slc28a2O88627 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC14.58□□□□□ -0.08
Slc28a2O88627 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Slc28a2O88627 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Slc28a2O88627 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC14.58□□□□□ -0.08
Slc28a2O88627 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Slc28a2O88627 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Slc28a2O88627 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Slc28a2O88627 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Slc28a2O88627 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Slc28a2O88627 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC14.58□□□□□ -0.08
Slc28a2O88627 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Slc28a2O88627 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC14.58□□□□□ -0.08
Slc28a2O88627 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC14.58□□□□□ -0.08
Slc28a2O88627 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Slc28a2O88627 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Slc28a2O88627 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Slc28a2O88627 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Slc28a2O88627 Tfap2a-209ENSMUST00000225180 1828 ntBASIC14.57□□□□□ -0.08
Slc28a2O88627 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Slc28a2O88627 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Slc28a2O88627 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
Slc28a2O88627 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Slc28a2O88627 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Slc28a2O88627 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Slc28a2O88627 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Slc28a2O88627 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Slc28a2O88627 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Slc28a2O88627 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC14.57□□□□□ -0.08
Slc28a2O88627 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Slc28a2O88627 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC14.57□□□□□ -0.08
Slc28a2O88627 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
Slc28a2O88627 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Slc28a2O88627 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Slc28a2O88627 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Slc28a2O88627 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Slc28a2O88627 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Slc28a2O88627 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Slc28a2O88627 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Slc28a2O88627 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Slc28a2O88627 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC14.57□□□□□ -0.08
Slc28a2O88627 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Slc28a2O88627 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Slc28a2O88627 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Slc28a2O88627 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Slc28a2O88627 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Slc28a2O88627 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Slc28a2O88627 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Slc28a2O88627 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Slc28a2O88627 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Slc28a2O88627 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Slc28a2O88627 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Slc28a2O88627 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Slc28a2O88627 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Slc28a2O88627 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Slc28a2O88627 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Slc28a2O88627 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Slc28a2O88627 Gm3375-201ENSMUST00000203929 796 ntBASIC14.56□□□□□ -0.08
Slc28a2O88627 Il3ra-202ENSMUST00000223589 738 ntBASIC14.56□□□□□ -0.08
Slc28a2O88627 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Slc28a2O88627 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Slc28a2O88627 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Slc28a2O88627 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Slc28a2O88627 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Slc28a2O88627 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Slc28a2O88627 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Slc28a2O88627 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Slc28a2O88627 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Slc28a2O88627 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Slc28a2O88627 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Slc28a2O88627 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Slc28a2O88627 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC14.56□□□□□ -0.08
Slc28a2O88627 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Slc28a2O88627 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Slc28a2O88627 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Slc28a2O88627 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Slc28a2O88627 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Slc28a2O88627 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Slc28a2O88627 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Slc28a2O88627 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Slc28a2O88627 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Slc28a2O88627 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Slc28a2O88627 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Slc28a2O88627 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Slc28a2O88627 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Slc28a2O88627 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Slc28a2O88627 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Slc28a2O88627 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Slc28a2O88627 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC14.55□□□□□ -0.08
Slc28a2O88627 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Slc28a2O88627 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC14.55□□□□□ -0.08
Slc28a2O88627 AC120002.2-201ENSMUST00000220205 773 ntBASIC14.55□□□□□ -0.08
Slc28a2O88627 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Slc28a2O88627 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 70.5 ms