Protein–RNA interactions for Protein: O88472

Tnfrsf17, Tumor necrosis factor receptor superfamily member 17, mousemouse

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf17O88472 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Tnfrsf17O88472 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Tnfrsf17O88472 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Tnfrsf17O88472 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Tnfrsf17O88472 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Tnfrsf17O88472 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Tnfrsf17O88472 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Tnfrsf17O88472 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Tnfrsf17O88472 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Tnfrsf17O88472 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Tnfrsf17O88472 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Tnfrsf17O88472 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Tnfrsf17O88472 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Tnfrsf17O88472 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Tnfrsf17O88472 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Tnfrsf17O88472 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Tnfrsf17O88472 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Tnfrsf17O88472 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Tnfrsf17O88472 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Tnfrsf17O88472 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Tnfrsf17O88472 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Tnfrsf17O88472 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Tnfrsf17O88472 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Tnfrsf17O88472 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC15.17■□□□□ 0.02
Tnfrsf17O88472 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC15.17■□□□□ 0.02
Tnfrsf17O88472 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Tnfrsf17O88472 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Tnfrsf17O88472 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC15.17■□□□□ 0.02
Tnfrsf17O88472 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Tnfrsf17O88472 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC15.17■□□□□ 0.02
Tnfrsf17O88472 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Tnfrsf17O88472 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Tnfrsf17O88472 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Tnfrsf17O88472 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Tnfrsf17O88472 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Tnfrsf17O88472 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Tnfrsf17O88472 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC15.17■□□□□ 0.02
Tnfrsf17O88472 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Tnfrsf17O88472 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Tnfrsf17O88472 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Tnfrsf17O88472 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Tnfrsf17O88472 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC15.16■□□□□ 0.02
Tnfrsf17O88472 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Tnfrsf17O88472 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Tnfrsf17O88472 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Tnfrsf17O88472 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Tnfrsf17O88472 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Tnfrsf17O88472 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Tnfrsf17O88472 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Tnfrsf17O88472 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Tnfrsf17O88472 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Tnfrsf17O88472 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Tnfrsf17O88472 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC15.16■□□□□ 0.02
Tnfrsf17O88472 Mir7023-201ENSMUST00000185093 64 ntBASIC15.16■□□□□ 0.02
Tnfrsf17O88472 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Tnfrsf17O88472 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC15.16■□□□□ 0.02
Tnfrsf17O88472 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Tnfrsf17O88472 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Tnfrsf17O88472 AC159106.1-201ENSMUST00000224421 690 ntBASIC15.16■□□□□ 0.02
Tnfrsf17O88472 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Tnfrsf17O88472 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Tnfrsf17O88472 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Tnfrsf17O88472 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC15.16■□□□□ 0.02
Tnfrsf17O88472 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Tnfrsf17O88472 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC15.16■□□□□ 0.02
Tnfrsf17O88472 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Tnfrsf17O88472 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Tnfrsf17O88472 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Tnfrsf17O88472 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
Tnfrsf17O88472 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Tnfrsf17O88472 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Tnfrsf17O88472 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Tnfrsf17O88472 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC15.15■□□□□ 0.02
Tnfrsf17O88472 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Tnfrsf17O88472 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Tnfrsf17O88472 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Tnfrsf17O88472 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Tnfrsf17O88472 Gm11764-201ENSMUST00000120221 623 ntBASIC15.15■□□□□ 0.02
Tnfrsf17O88472 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC15.15■□□□□ 0.02
Tnfrsf17O88472 AC140375.2-201ENSMUST00000225283 584 ntBASIC15.15■□□□□ 0.02
Tnfrsf17O88472 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Tnfrsf17O88472 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Tnfrsf17O88472 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Tnfrsf17O88472 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Tnfrsf17O88472 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Tnfrsf17O88472 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Tnfrsf17O88472 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC15.15■□□□□ 0.02
Tnfrsf17O88472 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Tnfrsf17O88472 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Tnfrsf17O88472 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Tnfrsf17O88472 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Tnfrsf17O88472 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Tnfrsf17O88472 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Tnfrsf17O88472 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Tnfrsf17O88472 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC15.14■□□□□ 0.01
Tnfrsf17O88472 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Tnfrsf17O88472 Gm43231-201ENSMUST00000202960 2258 ntBASIC15.14■□□□□ 0.01
Tnfrsf17O88472 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Tnfrsf17O88472 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC15.14■□□□□ 0.01
Tnfrsf17O88472 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 15.3 ms