Protein–RNA interactions for Protein: O88427

Cacna1h, Voltage-dependent T-type calcium channel subunit alpha-1H, mousemouse

Predictions only

Length 2,365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1hO88427 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Cacna1hO88427 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC15.89■□□□□ 0.13
Cacna1hO88427 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Cacna1hO88427 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Cacna1hO88427 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
Cacna1hO88427 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Cacna1hO88427 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Cacna1hO88427 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Cacna1hO88427 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC15.89■□□□□ 0.13
Cacna1hO88427 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC15.89■□□□□ 0.13
Cacna1hO88427 Gm44719-201ENSMUST00000206404 149 ntBASIC15.89■□□□□ 0.13
Cacna1hO88427 Gm45167-201ENSMUST00000208007 322 ntBASIC15.89■□□□□ 0.13
Cacna1hO88427 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Cacna1hO88427 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC15.89■□□□□ 0.13
Cacna1hO88427 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Cacna1hO88427 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Cacna1hO88427 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cacna1hO88427 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cacna1hO88427 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cacna1hO88427 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Cacna1hO88427 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cacna1hO88427 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Cacna1hO88427 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
Cacna1hO88427 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cacna1hO88427 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cacna1hO88427 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cacna1hO88427 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cacna1hO88427 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Cacna1hO88427 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
Cacna1hO88427 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cacna1hO88427 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
Cacna1hO88427 Gm5628-201ENSMUST00000222318 1049 ntBASIC15.88■□□□□ 0.13
Cacna1hO88427 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cacna1hO88427 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cacna1hO88427 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cacna1hO88427 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cacna1hO88427 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC15.87■□□□□ 0.13
Cacna1hO88427 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC15.87■□□□□ 0.13
Cacna1hO88427 AC125350.2-201ENSMUST00000224737 727 ntBASIC15.87■□□□□ 0.13
Cacna1hO88427 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cacna1hO88427 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Cacna1hO88427 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cacna1hO88427 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cacna1hO88427 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cacna1hO88427 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cacna1hO88427 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cacna1hO88427 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC15.87■□□□□ 0.13
Cacna1hO88427 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Cacna1hO88427 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC15.87■□□□□ 0.13
Cacna1hO88427 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC15.87■□□□□ 0.13
Cacna1hO88427 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Cacna1hO88427 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Cacna1hO88427 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cacna1hO88427 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC15.87■□□□□ 0.13
Cacna1hO88427 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cacna1hO88427 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC15.87■□□□□ 0.13
Cacna1hO88427 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Cacna1hO88427 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cacna1hO88427 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Cacna1hO88427 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cacna1hO88427 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
Cacna1hO88427 Fcho2-208ENSMUST00000224992 2964 ntBASIC15.87■□□□□ 0.13
Cacna1hO88427 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cacna1hO88427 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cacna1hO88427 Gm43545-201ENSMUST00000196765 2779 ntBASIC15.87■□□□□ 0.13
Cacna1hO88427 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC15.86■□□□□ 0.13
Cacna1hO88427 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
Cacna1hO88427 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
Cacna1hO88427 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC15.86■□□□□ 0.13
Cacna1hO88427 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC15.86■□□□□ 0.13
Cacna1hO88427 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC15.86■□□□□ 0.13
Cacna1hO88427 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC15.86■□□□□ 0.13
Cacna1hO88427 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Cacna1hO88427 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Cacna1hO88427 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Cacna1hO88427 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
Cacna1hO88427 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Cacna1hO88427 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Cacna1hO88427 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Cacna1hO88427 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Cacna1hO88427 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC15.86■□□□□ 0.13
Cacna1hO88427 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Cacna1hO88427 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC15.86■□□□□ 0.13
Cacna1hO88427 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Cacna1hO88427 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Cacna1hO88427 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Cacna1hO88427 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
Cacna1hO88427 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Cacna1hO88427 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Cacna1hO88427 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Cacna1hO88427 Gm25287-201ENSMUST00000103846 110 ntBASIC15.85■□□□□ 0.13
Cacna1hO88427 Gm22918-201ENSMUST00000103855 110 ntBASIC15.85■□□□□ 0.13
Cacna1hO88427 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC15.85■□□□□ 0.13
Cacna1hO88427 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC15.85■□□□□ 0.13
Cacna1hO88427 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Cacna1hO88427 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Cacna1hO88427 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Cacna1hO88427 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Cacna1hO88427 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Cacna1hO88427 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms