Protein–RNA interactions for Protein: O70477

Pknox1, Homeobox protein PKNOX1, mousemouse

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pknox1O70477 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pknox1O70477 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pknox1O70477 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pknox1O70477 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pknox1O70477 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pknox1O70477 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Pknox1O70477 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pknox1O70477 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pknox1O70477 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Pknox1O70477 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pknox1O70477 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pknox1O70477 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pknox1O70477 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Pknox1O70477 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC16.28■□□□□ 0.2
Pknox1O70477 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC16.28■□□□□ 0.2
Pknox1O70477 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Pknox1O70477 Gm27011-201ENSMUST00000182352 972 ntBASIC16.28■□□□□ 0.2
Pknox1O70477 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC16.28■□□□□ 0.2
Pknox1O70477 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pknox1O70477 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pknox1O70477 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pknox1O70477 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pknox1O70477 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pknox1O70477 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pknox1O70477 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pknox1O70477 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pknox1O70477 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pknox1O70477 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC16.28■□□□□ 0.2
Pknox1O70477 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Pknox1O70477 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pknox1O70477 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pknox1O70477 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pknox1O70477 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Pknox1O70477 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pknox1O70477 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
Pknox1O70477 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pknox1O70477 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Pknox1O70477 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pknox1O70477 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Pknox1O70477 Gm11539-201ENSMUST00000119837 557 ntBASIC16.27■□□□□ 0.2
Pknox1O70477 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC16.27■□□□□ 0.2
Pknox1O70477 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC16.27■□□□□ 0.2
Pknox1O70477 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC16.27■□□□□ 0.2
Pknox1O70477 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC16.27■□□□□ 0.2
Pknox1O70477 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pknox1O70477 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Pknox1O70477 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Pknox1O70477 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Pknox1O70477 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Pknox1O70477 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Pknox1O70477 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Pknox1O70477 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Pknox1O70477 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC16.27■□□□□ 0.19
Pknox1O70477 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Pknox1O70477 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC16.26■□□□□ 0.19
Pknox1O70477 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pknox1O70477 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Pknox1O70477 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC16.26■□□□□ 0.19
Pknox1O70477 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Pknox1O70477 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Pknox1O70477 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC16.26■□□□□ 0.19
Pknox1O70477 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pknox1O70477 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC16.26■□□□□ 0.19
Pknox1O70477 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Pknox1O70477 Gm5421-201ENSMUST00000181698 2354 ntBASIC16.26■□□□□ 0.19
Pknox1O70477 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC16.26■□□□□ 0.19
Pknox1O70477 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Pknox1O70477 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Pknox1O70477 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC16.26■□□□□ 0.19
Pknox1O70477 Gm18115-201ENSMUST00000221209 621 ntBASIC16.26■□□□□ 0.19
Pknox1O70477 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pknox1O70477 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pknox1O70477 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pknox1O70477 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Pknox1O70477 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pknox1O70477 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pknox1O70477 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pknox1O70477 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC16.26■□□□□ 0.19
Pknox1O70477 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pknox1O70477 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Pknox1O70477 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pknox1O70477 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pknox1O70477 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pknox1O70477 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pknox1O70477 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pknox1O70477 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC16.26■□□□□ 0.19
Pknox1O70477 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pknox1O70477 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC16.25■□□□□ 0.19
Pknox1O70477 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pknox1O70477 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pknox1O70477 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pknox1O70477 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pknox1O70477 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pknox1O70477 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pknox1O70477 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Pknox1O70477 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Pknox1O70477 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pknox1O70477 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Pknox1O70477 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC16.25■□□□□ 0.19
Pknox1O70477 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms