Protein–RNA interactions for Protein: O55240

Rdh5, 11-cis retinol dehydrogenase, mousemouse

Predictions only

Length 318 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rdh5O55240 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rdh5O55240 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rdh5O55240 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rdh5O55240 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Rdh5O55240 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC15.53■□□□□ 0.08
Rdh5O55240 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Rdh5O55240 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rdh5O55240 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rdh5O55240 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rdh5O55240 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rdh5O55240 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Rdh5O55240 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rdh5O55240 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rdh5O55240 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rdh5O55240 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Rdh5O55240 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Rdh5O55240 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Rdh5O55240 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Rdh5O55240 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Rdh5O55240 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Rdh5O55240 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Rdh5O55240 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.08
Rdh5O55240 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Rdh5O55240 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Rdh5O55240 Gm21362-201ENSMUST00000194272 928 ntBASIC15.52■□□□□ 0.08
Rdh5O55240 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC15.52■□□□□ 0.08
Rdh5O55240 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Rdh5O55240 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Rdh5O55240 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
Rdh5O55240 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Rdh5O55240 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Rdh5O55240 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Rdh5O55240 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Rdh5O55240 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Rdh5O55240 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Rdh5O55240 Ddx41-204ENSMUST00000224765 2199 ntBASIC15.52■□□□□ 0.07
Rdh5O55240 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Rdh5O55240 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Rdh5O55240 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC15.52■□□□□ 0.07
Rdh5O55240 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Rdh5O55240 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rdh5O55240 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rdh5O55240 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rdh5O55240 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rdh5O55240 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rdh5O55240 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Rdh5O55240 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Rdh5O55240 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Rdh5O55240 AA414768-201ENSMUST00000121924 1257 ntBASIC15.51■□□□□ 0.07
Rdh5O55240 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rdh5O55240 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rdh5O55240 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Rdh5O55240 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Rdh5O55240 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rdh5O55240 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Rdh5O55240 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rdh5O55240 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rdh5O55240 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rdh5O55240 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rdh5O55240 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rdh5O55240 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rdh5O55240 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rdh5O55240 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Rdh5O55240 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Rdh5O55240 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Rdh5O55240 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Rdh5O55240 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Rdh5O55240 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Rdh5O55240 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
Rdh5O55240 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Rdh5O55240 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Rdh5O55240 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC15.5■□□□□ 0.07
Rdh5O55240 Gm6728-201ENSMUST00000178117 1065 ntBASIC15.5■□□□□ 0.07
Rdh5O55240 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
Rdh5O55240 Gm29707-201ENSMUST00000196325 491 ntBASIC15.5■□□□□ 0.07
Rdh5O55240 AC122351.1-201ENSMUST00000220467 126 ntBASIC15.5■□□□□ 0.07
Rdh5O55240 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Rdh5O55240 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Rdh5O55240 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Rdh5O55240 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Rdh5O55240 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC15.5■□□□□ 0.07
Rdh5O55240 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Rdh5O55240 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Rdh5O55240 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC15.5■□□□□ 0.07
Rdh5O55240 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Rdh5O55240 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
Rdh5O55240 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Rdh5O55240 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Rdh5O55240 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Rdh5O55240 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Rdh5O55240 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Rdh5O55240 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Rdh5O55240 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Rdh5O55240 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Rdh5O55240 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
Rdh5O55240 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Rdh5O55240 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC15.49■□□□□ 0.07
Rdh5O55240 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Rdh5O55240 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC15.49■□□□□ 0.07
Rdh5O55240 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms