Protein–RNA interactions for Protein: O55142

Rpl35a, 60S ribosomal protein L35a, mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl35aO55142 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rpl35aO55142 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rpl35aO55142 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Rpl35aO55142 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
Rpl35aO55142 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Rpl35aO55142 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Rpl35aO55142 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Rpl35aO55142 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Rpl35aO55142 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Rpl35aO55142 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC12.21□□□□□ -0.45
Rpl35aO55142 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Rpl35aO55142 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Rpl35aO55142 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Rpl35aO55142 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Rpl35aO55142 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Rpl35aO55142 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Rpl35aO55142 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
Rpl35aO55142 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Rpl35aO55142 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Rpl35aO55142 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Rpl35aO55142 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Rpl35aO55142 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Rpl35aO55142 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC12.21□□□□□ -0.45
Rpl35aO55142 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC12.21□□□□□ -0.46
Rpl35aO55142 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Rpl35aO55142 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
Rpl35aO55142 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Rpl35aO55142 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Rpl35aO55142 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Rpl35aO55142 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Rpl35aO55142 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Rpl35aO55142 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC12.21□□□□□ -0.46
Rpl35aO55142 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC12.21□□□□□ -0.46
Rpl35aO55142 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Rpl35aO55142 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Rpl35aO55142 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Rpl35aO55142 Cxcl14-202ENSMUST00000224801 1467 ntBASIC12.21□□□□□ -0.46
Rpl35aO55142 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Rpl35aO55142 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rpl35aO55142 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rpl35aO55142 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rpl35aO55142 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rpl35aO55142 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rpl35aO55142 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC12.2□□□□□ -0.46
Rpl35aO55142 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Rpl35aO55142 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC12.2□□□□□ -0.46
Rpl35aO55142 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Rpl35aO55142 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rpl35aO55142 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rpl35aO55142 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rpl35aO55142 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Rpl35aO55142 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Rpl35aO55142 Gm11860-201ENSMUST00000122346 1010 ntBASIC12.2□□□□□ -0.46
Rpl35aO55142 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Rpl35aO55142 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rpl35aO55142 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Rpl35aO55142 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Rpl35aO55142 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rpl35aO55142 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rpl35aO55142 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rpl35aO55142 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rpl35aO55142 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rpl35aO55142 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rpl35aO55142 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC12.2□□□□□ -0.46
Rpl35aO55142 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rpl35aO55142 Gm45203-201ENSMUST00000206384 1831 ntBASIC12.2□□□□□ -0.46
Rpl35aO55142 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Rpl35aO55142 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC12.2□□□□□ -0.46
Rpl35aO55142 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rpl35aO55142 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rpl35aO55142 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Rpl35aO55142 Gm43294-201ENSMUST00000202850 2490 ntBASIC12.19□□□□□ -0.46
Rpl35aO55142 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rpl35aO55142 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rpl35aO55142 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rpl35aO55142 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rpl35aO55142 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Rpl35aO55142 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC12.19□□□□□ -0.46
Rpl35aO55142 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Rpl35aO55142 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Rpl35aO55142 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rpl35aO55142 Gm11950-201ENSMUST00000121615 838 ntBASIC12.19□□□□□ -0.46
Rpl35aO55142 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC12.19□□□□□ -0.46
Rpl35aO55142 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC12.19□□□□□ -0.46
Rpl35aO55142 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rpl35aO55142 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Rpl35aO55142 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Rpl35aO55142 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rpl35aO55142 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC12.19□□□□□ -0.46
Rpl35aO55142 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rpl35aO55142 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rpl35aO55142 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rpl35aO55142 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Rpl35aO55142 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rpl35aO55142 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rpl35aO55142 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rpl35aO55142 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
Rpl35aO55142 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rpl35aO55142 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rpl35aO55142 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC12.19□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms