Protein–RNA interactions for Protein: O55038

Cxcl13, C-X-C motif chemokine 13, mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl13O55038 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cxcl13O55038 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cxcl13O55038 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cxcl13O55038 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Cxcl13O55038 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Cxcl13O55038 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cxcl13O55038 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cxcl13O55038 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cxcl13O55038 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cxcl13O55038 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cxcl13O55038 Gm1818-201ENSMUST00000169406 1184 ntBASIC13.82□□□□□ -0.2
Cxcl13O55038 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC13.82□□□□□ -0.2
Cxcl13O55038 Gm7507-201ENSMUST00000183053 1008 ntBASIC13.82□□□□□ -0.2
Cxcl13O55038 Gm44771-201ENSMUST00000206975 626 ntBASIC13.82□□□□□ -0.2
Cxcl13O55038 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cxcl13O55038 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC13.82□□□□□ -0.2
Cxcl13O55038 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cxcl13O55038 Rps4l-201ENSMUST00000071745 943 ntBASIC13.82□□□□□ -0.2
Cxcl13O55038 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cxcl13O55038 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC13.82□□□□□ -0.2
Cxcl13O55038 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cxcl13O55038 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cxcl13O55038 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cxcl13O55038 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cxcl13O55038 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cxcl13O55038 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cxcl13O55038 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Cxcl13O55038 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cxcl13O55038 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC13.81□□□□□ -0.2
Cxcl13O55038 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Cxcl13O55038 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Cxcl13O55038 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC13.81□□□□□ -0.2
Cxcl13O55038 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC13.81□□□□□ -0.2
Cxcl13O55038 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Cxcl13O55038 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cxcl13O55038 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Cxcl13O55038 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
Cxcl13O55038 Gm13830-205ENSMUST00000201195 1155 ntBASIC13.81□□□□□ -0.2
Cxcl13O55038 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cxcl13O55038 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC13.81□□□□□ -0.2
Cxcl13O55038 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Cxcl13O55038 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Cxcl13O55038 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cxcl13O55038 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Cxcl13O55038 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cxcl13O55038 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cxcl13O55038 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Cxcl13O55038 Gm43294-201ENSMUST00000202850 2490 ntBASIC13.81□□□□□ -0.2
Cxcl13O55038 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cxcl13O55038 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Cxcl13O55038 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cxcl13O55038 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cxcl13O55038 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Cxcl13O55038 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cxcl13O55038 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cxcl13O55038 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Cxcl13O55038 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cxcl13O55038 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cxcl13O55038 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cxcl13O55038 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC13.8□□□□□ -0.2
Cxcl13O55038 Gm25745-201ENSMUST00000174945 133 ntBASIC13.8□□□□□ -0.2
Cxcl13O55038 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC13.8□□□□□ -0.2
Cxcl13O55038 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC13.8□□□□□ -0.2
Cxcl13O55038 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC13.8□□□□□ -0.2
Cxcl13O55038 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cxcl13O55038 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cxcl13O55038 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cxcl13O55038 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Cxcl13O55038 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cxcl13O55038 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cxcl13O55038 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cxcl13O55038 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cxcl13O55038 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Cxcl13O55038 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cxcl13O55038 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cxcl13O55038 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cxcl13O55038 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Cxcl13O55038 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cxcl13O55038 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC13.79□□□□□ -0.2
Cxcl13O55038 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC13.79□□□□□ -0.2
Cxcl13O55038 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cxcl13O55038 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cxcl13O55038 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cxcl13O55038 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cxcl13O55038 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cxcl13O55038 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cxcl13O55038 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Cxcl13O55038 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Cxcl13O55038 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC13.79□□□□□ -0.2
Cxcl13O55038 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC13.79□□□□□ -0.2
Cxcl13O55038 Gm18195-201ENSMUST00000207604 706 ntBASIC13.79□□□□□ -0.2
Cxcl13O55038 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cxcl13O55038 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cxcl13O55038 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Cxcl13O55038 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Cxcl13O55038 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cxcl13O55038 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cxcl13O55038 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Cxcl13O55038 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Cxcl13O55038 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms