Protein–RNA interactions for Protein: O35595

Ptch2, Protein patched homolog 2, mousemouse

Predictions only

Length 1,182 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptch2O35595 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ptch2O35595 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC16.75■□□□□ 0.27
Ptch2O35595 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC16.75■□□□□ 0.27
Ptch2O35595 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ptch2O35595 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ptch2O35595 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC16.75■□□□□ 0.27
Ptch2O35595 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Ptch2O35595 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Ptch2O35595 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ptch2O35595 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ptch2O35595 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ptch2O35595 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ptch2O35595 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC16.75■□□□□ 0.27
Ptch2O35595 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ptch2O35595 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Ptch2O35595 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ptch2O35595 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Ptch2O35595 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ptch2O35595 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Ptch2O35595 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Ptch2O35595 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Ptch2O35595 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ptch2O35595 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC16.74■□□□□ 0.27
Ptch2O35595 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Ptch2O35595 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC16.74■□□□□ 0.27
Ptch2O35595 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Ptch2O35595 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC16.74■□□□□ 0.27
Ptch2O35595 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ptch2O35595 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Ptch2O35595 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ptch2O35595 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ptch2O35595 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ptch2O35595 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ptch2O35595 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ptch2O35595 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ptch2O35595 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ptch2O35595 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Ptch2O35595 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ptch2O35595 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ptch2O35595 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Ptch2O35595 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Ptch2O35595 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Ptch2O35595 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC16.73■□□□□ 0.27
Ptch2O35595 Gm18733-201ENSMUST00000173950 856 ntBASIC16.73■□□□□ 0.27
Ptch2O35595 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Ptch2O35595 Gm27525-201ENSMUST00000184465 107 ntBASIC16.73■□□□□ 0.27
Ptch2O35595 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC16.73■□□□□ 0.27
Ptch2O35595 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC16.73■□□□□ 0.27
Ptch2O35595 AC161829.1-201ENSMUST00000220298 281 ntBASIC16.73■□□□□ 0.27
Ptch2O35595 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ptch2O35595 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Ptch2O35595 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC16.73■□□□□ 0.27
Ptch2O35595 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ptch2O35595 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ptch2O35595 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ptch2O35595 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC16.73■□□□□ 0.27
Ptch2O35595 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC16.73■□□□□ 0.27
Ptch2O35595 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Ptch2O35595 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ptch2O35595 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ptch2O35595 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ptch2O35595 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC16.72■□□□□ 0.27
Ptch2O35595 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ptch2O35595 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ptch2O35595 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ptch2O35595 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Ptch2O35595 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ptch2O35595 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC16.72■□□□□ 0.27
Ptch2O35595 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Ptch2O35595 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Ptch2O35595 Gm6376-201ENSMUST00000209407 580 ntBASIC16.72■□□□□ 0.27
Ptch2O35595 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC16.72■□□□□ 0.27
Ptch2O35595 Rps4l-201ENSMUST00000071745 943 ntBASIC16.72■□□□□ 0.27
Ptch2O35595 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ptch2O35595 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ptch2O35595 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Ptch2O35595 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Ptch2O35595 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Ptch2O35595 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ptch2O35595 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Ptch2O35595 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC16.72■□□□□ 0.27
Ptch2O35595 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC16.72■□□□□ 0.27
Ptch2O35595 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ptch2O35595 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ptch2O35595 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC16.72■□□□□ 0.27
Ptch2O35595 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ptch2O35595 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ptch2O35595 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ptch2O35595 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ptch2O35595 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Ptch2O35595 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ptch2O35595 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC16.71■□□□□ 0.27
Ptch2O35595 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ptch2O35595 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ptch2O35595 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ptch2O35595 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ptch2O35595 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC16.71■□□□□ 0.27
Ptch2O35595 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ptch2O35595 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC16.71■□□□□ 0.27
Ptch2O35595 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC16.71■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms