Protein–RNA interactions for Protein: O35393

Efnb3, Ephrin-B3, mousemouse

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Efnb3O35393 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Efnb3O35393 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Efnb3O35393 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Efnb3O35393 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Efnb3O35393 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Efnb3O35393 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Efnb3O35393 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Efnb3O35393 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Efnb3O35393 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Efnb3O35393 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Efnb3O35393 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
Efnb3O35393 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Efnb3O35393 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC12.98□□□□□ -0.33
Efnb3O35393 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Efnb3O35393 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Efnb3O35393 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Efnb3O35393 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Efnb3O35393 AC153526.5-201ENSMUST00000218661 2147 ntBASIC12.98□□□□□ -0.33
Efnb3O35393 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Efnb3O35393 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Efnb3O35393 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Efnb3O35393 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Efnb3O35393 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Efnb3O35393 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC12.98□□□□□ -0.33
Efnb3O35393 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Efnb3O35393 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Efnb3O35393 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Efnb3O35393 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Efnb3O35393 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC12.97□□□□□ -0.33
Efnb3O35393 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Efnb3O35393 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC12.97□□□□□ -0.33
Efnb3O35393 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Efnb3O35393 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Efnb3O35393 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC12.97□□□□□ -0.33
Efnb3O35393 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Efnb3O35393 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Efnb3O35393 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC12.97□□□□□ -0.33
Efnb3O35393 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Efnb3O35393 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC12.97□□□□□ -0.33
Efnb3O35393 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Efnb3O35393 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Efnb3O35393 Gm27000-201ENSMUST00000182943 842 ntBASIC12.97□□□□□ -0.33
Efnb3O35393 Gm9694-201ENSMUST00000193347 1189 ntBASIC12.97□□□□□ -0.33
Efnb3O35393 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Efnb3O35393 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Efnb3O35393 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Efnb3O35393 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Efnb3O35393 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Efnb3O35393 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Efnb3O35393 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Efnb3O35393 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC12.97□□□□□ -0.33
Efnb3O35393 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Efnb3O35393 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Efnb3O35393 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Efnb3O35393 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Efnb3O35393 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Efnb3O35393 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Efnb3O35393 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Efnb3O35393 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC12.97□□□□□ -0.33
Efnb3O35393 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Efnb3O35393 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
Efnb3O35393 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Efnb3O35393 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Efnb3O35393 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Efnb3O35393 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Efnb3O35393 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC12.96□□□□□ -0.33
Efnb3O35393 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Efnb3O35393 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Efnb3O35393 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Efnb3O35393 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC12.96□□□□□ -0.33
Efnb3O35393 Gm5643-201ENSMUST00000117081 966 ntBASIC12.96□□□□□ -0.33
Efnb3O35393 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Efnb3O35393 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC12.96□□□□□ -0.33
Efnb3O35393 Gm27011-201ENSMUST00000182352 972 ntBASIC12.96□□□□□ -0.33
Efnb3O35393 Gm37292-201ENSMUST00000192062 758 ntBASIC12.96□□□□□ -0.33
Efnb3O35393 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC12.96□□□□□ -0.33
Efnb3O35393 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Efnb3O35393 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Efnb3O35393 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC12.96□□□□□ -0.34
Efnb3O35393 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Efnb3O35393 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Efnb3O35393 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Efnb3O35393 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Efnb3O35393 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Efnb3O35393 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Efnb3O35393 Prob1-201ENSMUST00000097619 3021 ntBASIC12.95□□□□□ -0.34
Efnb3O35393 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Efnb3O35393 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Efnb3O35393 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Efnb3O35393 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Efnb3O35393 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
Efnb3O35393 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC12.95□□□□□ -0.34
Efnb3O35393 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC12.95□□□□□ -0.34
Efnb3O35393 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Efnb3O35393 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Efnb3O35393 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Efnb3O35393 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Efnb3O35393 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Efnb3O35393 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Efnb3O35393 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms