Protein–RNA interactions for Protein: O08788

Dctn1, Dynactin subunit 1, mousemouse

Predictions only

Length 1,281 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dctn1O08788 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Dctn1O08788 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
Dctn1O08788 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
Dctn1O08788 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
Dctn1O08788 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
Dctn1O08788 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Dctn1O08788 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC20.15■□□□□ 0.82
Dctn1O08788 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Dctn1O08788 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC20.15■□□□□ 0.82
Dctn1O08788 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC20.15■□□□□ 0.82
Dctn1O08788 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Dctn1O08788 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Dctn1O08788 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Dctn1O08788 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Dctn1O08788 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Dctn1O08788 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Dctn1O08788 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Dctn1O08788 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
Dctn1O08788 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC20.14■□□□□ 0.82
Dctn1O08788 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Dctn1O08788 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Dctn1O08788 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC20.14■□□□□ 0.81
Dctn1O08788 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Dctn1O08788 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Dctn1O08788 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Dctn1O08788 Gm4459-201ENSMUST00000118750 468 ntBASIC20.14■□□□□ 0.81
Dctn1O08788 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC20.14■□□□□ 0.81
Dctn1O08788 Gm8349-201ENSMUST00000182720 1003 ntBASIC20.14■□□□□ 0.81
Dctn1O08788 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Dctn1O08788 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Dctn1O08788 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Dctn1O08788 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Dctn1O08788 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Dctn1O08788 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Dctn1O08788 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Dctn1O08788 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
Dctn1O08788 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC20.13■□□□□ 0.81
Dctn1O08788 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
Dctn1O08788 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC20.13■□□□□ 0.81
Dctn1O08788 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Dctn1O08788 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Dctn1O08788 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Dctn1O08788 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
Dctn1O08788 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Dctn1O08788 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Dctn1O08788 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Dctn1O08788 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Dctn1O08788 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Dctn1O08788 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Dctn1O08788 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
Dctn1O08788 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Dctn1O08788 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Dctn1O08788 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
Dctn1O08788 Gm8097-201ENSMUST00000117903 829 ntBASIC20.12■□□□□ 0.81
Dctn1O08788 Gm11780-201ENSMUST00000136880 516 ntBASIC20.12■□□□□ 0.81
Dctn1O08788 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Dctn1O08788 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Dctn1O08788 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC20.12■□□□□ 0.81
Dctn1O08788 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Dctn1O08788 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Dctn1O08788 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC20.12■□□□□ 0.81
Dctn1O08788 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Dctn1O08788 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC20.12■□□□□ 0.81
Dctn1O08788 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Dctn1O08788 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC20.11■□□□□ 0.81
Dctn1O08788 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Dctn1O08788 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Dctn1O08788 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC20.11■□□□□ 0.81
Dctn1O08788 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Dctn1O08788 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Dctn1O08788 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Dctn1O08788 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
Dctn1O08788 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
Dctn1O08788 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Dctn1O08788 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
Dctn1O08788 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC20.11■□□□□ 0.81
Dctn1O08788 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC20.11■□□□□ 0.81
Dctn1O08788 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC20.11■□□□□ 0.81
Dctn1O08788 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Dctn1O08788 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC20.11■□□□□ 0.81
Dctn1O08788 Gm6089-201ENSMUST00000197666 938 ntBASIC20.11■□□□□ 0.81
Dctn1O08788 Gm42670-201ENSMUST00000201816 1292 ntBASIC20.11■□□□□ 0.81
Dctn1O08788 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC20.11■□□□□ 0.81
Dctn1O08788 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Dctn1O08788 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Dctn1O08788 AC154222.1-201ENSMUST00000223882 475 ntBASIC20.11■□□□□ 0.81
Dctn1O08788 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC20.11■□□□□ 0.81
Dctn1O08788 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Dctn1O08788 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Dctn1O08788 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Dctn1O08788 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC20.11■□□□□ 0.81
Dctn1O08788 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Dctn1O08788 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Dctn1O08788 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Dctn1O08788 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Dctn1O08788 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Dctn1O08788 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC20.11■□□□□ 0.81
Dctn1O08788 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Dctn1O08788 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Dctn1O08788 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 47.8 ms