Protein–RNA interactions for Protein: G3X8Y1

Trim55, MCG19772, mousemouse

Predictions only

Length 545 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim55G3X8Y1 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim55G3X8Y1 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim55G3X8Y1 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC16.9■□□□□ 0.3
Trim55G3X8Y1 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim55G3X8Y1 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim55G3X8Y1 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Trim55G3X8Y1 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim55G3X8Y1 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim55G3X8Y1 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim55G3X8Y1 Gm10493-201ENSMUST00000097270 612 ntBASIC16.9■□□□□ 0.3
Trim55G3X8Y1 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC16.9■□□□□ 0.3
Trim55G3X8Y1 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim55G3X8Y1 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim55G3X8Y1 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim55G3X8Y1 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim55G3X8Y1 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Trim55G3X8Y1 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim55G3X8Y1 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim55G3X8Y1 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Trim55G3X8Y1 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim55G3X8Y1 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim55G3X8Y1 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim55G3X8Y1 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Trim55G3X8Y1 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.3
Trim55G3X8Y1 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC16.89■□□□□ 0.3
Trim55G3X8Y1 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC16.89■□□□□ 0.3
Trim55G3X8Y1 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Trim55G3X8Y1 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Trim55G3X8Y1 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Trim55G3X8Y1 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC16.89■□□□□ 0.29
Trim55G3X8Y1 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trim55G3X8Y1 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trim55G3X8Y1 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trim55G3X8Y1 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC16.89■□□□□ 0.29
Trim55G3X8Y1 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Trim55G3X8Y1 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC16.89■□□□□ 0.29
Trim55G3X8Y1 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC16.89■□□□□ 0.29
Trim55G3X8Y1 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trim55G3X8Y1 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC16.89■□□□□ 0.29
Trim55G3X8Y1 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Trim55G3X8Y1 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC16.89■□□□□ 0.29
Trim55G3X8Y1 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim55G3X8Y1 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim55G3X8Y1 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC16.88■□□□□ 0.29
Trim55G3X8Y1 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Trim55G3X8Y1 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim55G3X8Y1 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Trim55G3X8Y1 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Trim55G3X8Y1 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Trim55G3X8Y1 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim55G3X8Y1 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim55G3X8Y1 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim55G3X8Y1 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC16.88■□□□□ 0.29
Trim55G3X8Y1 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim55G3X8Y1 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim55G3X8Y1 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim55G3X8Y1 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Trim55G3X8Y1 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim55G3X8Y1 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim55G3X8Y1 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim55G3X8Y1 Gm45760-201ENSMUST00000212190 1782 ntBASIC16.88■□□□□ 0.29
Trim55G3X8Y1 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim55G3X8Y1 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC16.88■□□□□ 0.29
Trim55G3X8Y1 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC16.88■□□□□ 0.29
Trim55G3X8Y1 Mir8112-201ENSMUST00000184382 131 ntBASIC16.88■□□□□ 0.29
Trim55G3X8Y1 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC16.88■□□□□ 0.29
Trim55G3X8Y1 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim55G3X8Y1 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Trim55G3X8Y1 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Trim55G3X8Y1 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Trim55G3X8Y1 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim55G3X8Y1 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Trim55G3X8Y1 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim55G3X8Y1 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim55G3X8Y1 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim55G3X8Y1 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim55G3X8Y1 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim55G3X8Y1 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC16.88■□□□□ 0.29
Trim55G3X8Y1 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Trim55G3X8Y1 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Trim55G3X8Y1 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Trim55G3X8Y1 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Trim55G3X8Y1 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trim55G3X8Y1 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trim55G3X8Y1 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trim55G3X8Y1 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trim55G3X8Y1 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC16.87■□□□□ 0.29
Trim55G3X8Y1 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
Trim55G3X8Y1 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trim55G3X8Y1 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Trim55G3X8Y1 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Trim55G3X8Y1 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
Trim55G3X8Y1 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Trim55G3X8Y1 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
Trim55G3X8Y1 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trim55G3X8Y1 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trim55G3X8Y1 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Trim55G3X8Y1 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trim55G3X8Y1 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trim55G3X8Y1 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms