Protein–RNA interactions for Protein: G3UXB3

Nkx1-1, NK1 homeobox 1, mousemouse

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx1-1G3UXB3 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Nkx1-1G3UXB3 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Nkx1-1G3UXB3 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Nkx1-1G3UXB3 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Nkx1-1G3UXB3 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Nkx1-1G3UXB3 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Nkx1-1G3UXB3 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC18.71■□□□□ 0.58
Nkx1-1G3UXB3 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
Nkx1-1G3UXB3 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Nkx1-1G3UXB3 Dapk1-207ENSMUST00000226059 5009 ntBASIC18.7■□□□□ 0.58
Nkx1-1G3UXB3 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Nkx1-1G3UXB3 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Nkx1-1G3UXB3 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Nkx1-1G3UXB3 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Nkx1-1G3UXB3 Gm12718-202ENSMUST00000156144 660 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Nkx1-1G3UXB3 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Nkx1-1G3UXB3 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Nkx1-1G3UXB3 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Nkx1-1G3UXB3 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC18.7■□□□□ 0.58
Nkx1-1G3UXB3 Gm9931-201ENSMUST00000193584 1185 ntBASIC18.7■□□□□ 0.58
Nkx1-1G3UXB3 Gtpbp10-211ENSMUST00000198799 648 ntBASIC18.7■□□□□ 0.58
Nkx1-1G3UXB3 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC18.7■□□□□ 0.58
Nkx1-1G3UXB3 Gm7653-201ENSMUST00000214567 508 ntBASIC18.7■□□□□ 0.58
Nkx1-1G3UXB3 Gm1000-201ENSMUST00000220520 801 ntTSL 3 BASIC18.7■□□□□ 0.58
Nkx1-1G3UXB3 AC140397.2-201ENSMUST00000224213 834 ntBASIC18.7■□□□□ 0.58
Nkx1-1G3UXB3 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Nkx1-1G3UXB3 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
Nkx1-1G3UXB3 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Nkx1-1G3UXB3 Speer4c-201ENSMUST00000095005 1159 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Nkx1-1G3UXB3 Speer4d-201ENSMUST00000095006 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Nkx1-1G3UXB3 Vmn1r4-201ENSMUST00000096612 1034 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Nkx1-1G3UXB3 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Nkx1-1G3UXB3 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Nkx1-1G3UXB3 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Nkx1-1G3UXB3 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Nkx1-1G3UXB3 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Nkx1-1G3UXB3 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Nkx1-1G3UXB3 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
Nkx1-1G3UXB3 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Nkx1-1G3UXB3 Zfp799-202ENSMUST00000201499 651 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Nkx1-1G3UXB3 AC155252.2-201ENSMUST00000226946 680 ntBASIC18.69■□□□□ 0.58
Nkx1-1G3UXB3 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Nkx1-1G3UXB3 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Nkx1-1G3UXB3 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Nkx1-1G3UXB3 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Nkx1-1G3UXB3 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Nkx1-1G3UXB3 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Nkx1-1G3UXB3 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Nkx1-1G3UXB3 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Nkx1-1G3UXB3 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC18.68■□□□□ 0.58
Nkx1-1G3UXB3 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Nkx1-1G3UXB3 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Nkx1-1G3UXB3 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Nkx1-1G3UXB3 Npm1-204ENSMUST00000109354 1157 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Nkx1-1G3UXB3 Gm15074-201ENSMUST00000117603 936 ntBASIC18.68■□□□□ 0.58
Nkx1-1G3UXB3 Gm13365-201ENSMUST00000121188 973 ntBASIC18.68■□□□□ 0.58
Nkx1-1G3UXB3 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC18.68■□□□□ 0.58
Nkx1-1G3UXB3 Gm37293-201ENSMUST00000191658 295 ntBASIC18.68■□□□□ 0.58
Nkx1-1G3UXB3 Tmem243-203ENSMUST00000198935 849 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Nkx1-1G3UXB3 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Nkx1-1G3UXB3 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC18.68■□□□□ 0.58
Nkx1-1G3UXB3 AC124603.1-201ENSMUST00000223843 308 ntBASIC18.68■□□□□ 0.58
Nkx1-1G3UXB3 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
Nkx1-1G3UXB3 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Nkx1-1G3UXB3 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Nkx1-1G3UXB3 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Nkx1-1G3UXB3 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Nkx1-1G3UXB3 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Nkx1-1G3UXB3 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Nkx1-1G3UXB3 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC18.67■□□□□ 0.58
Nkx1-1G3UXB3 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Nkx1-1G3UXB3 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Nkx1-1G3UXB3 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Nkx1-1G3UXB3 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Nkx1-1G3UXB3 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Nkx1-1G3UXB3 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Nkx1-1G3UXB3 Gm13033-201ENSMUST00000117591 1057 ntBASIC18.67■□□□□ 0.58
Nkx1-1G3UXB3 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC18.67■□□□□ 0.58
Nkx1-1G3UXB3 Gm26722-201ENSMUST00000181237 1048 ntTSL 5 BASIC18.67■□□□□ 0.58
Nkx1-1G3UXB3 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Nkx1-1G3UXB3 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC18.67■□□□□ 0.58
Nkx1-1G3UXB3 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Nkx1-1G3UXB3 AC154572.2-201ENSMUST00000225105 997 ntBASIC18.67■□□□□ 0.58
Nkx1-1G3UXB3 AC159295.1-201ENSMUST00000225326 940 ntBASIC18.67■□□□□ 0.58
Nkx1-1G3UXB3 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC18.67■□□□□ 0.58
Nkx1-1G3UXB3 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Nkx1-1G3UXB3 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nkx1-1G3UXB3 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC18.66■□□□□ 0.58
Nkx1-1G3UXB3 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Nkx1-1G3UXB3 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nkx1-1G3UXB3 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC18.66■□□□□ 0.58
Nkx1-1G3UXB3 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC18.66■□□□□ 0.58
Nkx1-1G3UXB3 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC18.66■□□□□ 0.58
Nkx1-1G3UXB3 Esp18-201ENSMUST00000179848 1257 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Nkx1-1G3UXB3 Gm27430-201ENSMUST00000184585 107 ntBASIC18.66■□□□□ 0.58
Nkx1-1G3UXB3 Gm44333-201ENSMUST00000197168 107 ntBASIC18.66■□□□□ 0.58
Nkx1-1G3UXB3 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC18.66■□□□□ 0.58
Nkx1-1G3UXB3 Tceal9-201ENSMUST00000048687 1019 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nkx1-1G3UXB3 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nkx1-1G3UXB3 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms