Protein–RNA interactions for Protein: F6VAN0

Atf6, Cyclic AMP-dependent transcription factor ATF-6 alpha, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf6F6VAN0 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Atf6F6VAN0 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Atf6F6VAN0 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Atf6F6VAN0 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Atf6F6VAN0 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Atf6F6VAN0 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Atf6F6VAN0 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Atf6F6VAN0 Slc35b2-202ENSMUST00000223987 1766 ntBASIC16.83■□□□□ 0.28
Atf6F6VAN0 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC16.83■□□□□ 0.28
Atf6F6VAN0 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Atf6F6VAN0 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Atf6F6VAN0 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Atf6F6VAN0 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Atf6F6VAN0 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Atf6F6VAN0 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Atf6F6VAN0 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Atf6F6VAN0 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Atf6F6VAN0 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Atf6F6VAN0 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Atf6F6VAN0 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Atf6F6VAN0 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC16.82■□□□□ 0.28
Atf6F6VAN0 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Atf6F6VAN0 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Atf6F6VAN0 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Atf6F6VAN0 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Atf6F6VAN0 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
Atf6F6VAN0 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Atf6F6VAN0 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Atf6F6VAN0 Gm22697-201ENSMUST00000175194 63 ntBASIC16.82■□□□□ 0.28
Atf6F6VAN0 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Atf6F6VAN0 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC16.82■□□□□ 0.28
Atf6F6VAN0 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Atf6F6VAN0 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC16.82■□□□□ 0.28
Atf6F6VAN0 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Atf6F6VAN0 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Atf6F6VAN0 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Atf6F6VAN0 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Atf6F6VAN0 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC16.82■□□□□ 0.28
Atf6F6VAN0 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Atf6F6VAN0 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Atf6F6VAN0 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
Atf6F6VAN0 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Atf6F6VAN0 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC16.81■□□□□ 0.28
Atf6F6VAN0 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC16.81■□□□□ 0.28
Atf6F6VAN0 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Atf6F6VAN0 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Atf6F6VAN0 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Atf6F6VAN0 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Atf6F6VAN0 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Atf6F6VAN0 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Atf6F6VAN0 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Atf6F6VAN0 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Atf6F6VAN0 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Atf6F6VAN0 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Atf6F6VAN0 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Atf6F6VAN0 Gm27389-201ENSMUST00000183622 195 ntBASIC16.81■□□□□ 0.28
Atf6F6VAN0 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Atf6F6VAN0 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Atf6F6VAN0 Gm9987-201ENSMUST00000069768 567 ntBASIC16.81■□□□□ 0.28
Atf6F6VAN0 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Atf6F6VAN0 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Atf6F6VAN0 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Atf6F6VAN0 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC16.81■□□□□ 0.28
Atf6F6VAN0 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Atf6F6VAN0 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Atf6F6VAN0 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
Atf6F6VAN0 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC16.81■□□□□ 0.28
Atf6F6VAN0 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Atf6F6VAN0 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Atf6F6VAN0 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Atf6F6VAN0 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Atf6F6VAN0 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Atf6F6VAN0 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Atf6F6VAN0 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Atf6F6VAN0 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Atf6F6VAN0 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Atf6F6VAN0 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Atf6F6VAN0 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Atf6F6VAN0 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Atf6F6VAN0 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Atf6F6VAN0 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Atf6F6VAN0 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
Atf6F6VAN0 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Atf6F6VAN0 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
Atf6F6VAN0 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC16.8■□□□□ 0.28
Atf6F6VAN0 Gm18101-201ENSMUST00000215769 548 ntBASIC16.8■□□□□ 0.28
Atf6F6VAN0 Gm21559-201ENSMUST00000220638 855 ntBASIC16.8■□□□□ 0.28
Atf6F6VAN0 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Atf6F6VAN0 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC16.8■□□□□ 0.28
Atf6F6VAN0 Gm8587-201ENSMUST00000076538 843 ntBASIC16.8■□□□□ 0.28
Atf6F6VAN0 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Atf6F6VAN0 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Atf6F6VAN0 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Atf6F6VAN0 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Atf6F6VAN0 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC16.8■□□□□ 0.28
Atf6F6VAN0 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC16.8■□□□□ 0.28
Atf6F6VAN0 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC16.8■□□□□ 0.28
Atf6F6VAN0 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Atf6F6VAN0 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Atf6F6VAN0 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 45.1 ms