Protein–RNA interactions for Protein: E9PVD3

Dchs1, Protocadherin-16, mousemouse

Predictions only

Length 3,291 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dchs1E9PVD3 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Dchs1E9PVD3 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC14.43□□□□□ -0.1
Dchs1E9PVD3 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC14.43□□□□□ -0.1
Dchs1E9PVD3 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Dchs1E9PVD3 AC124549.3-201ENSMUST00000225541 367 ntBASIC14.43□□□□□ -0.1
Dchs1E9PVD3 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Dchs1E9PVD3 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Dchs1E9PVD3 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Dchs1E9PVD3 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Dchs1E9PVD3 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC14.43□□□□□ -0.1
Dchs1E9PVD3 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Dchs1E9PVD3 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Dchs1E9PVD3 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Dchs1E9PVD3 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Dchs1E9PVD3 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Dchs1E9PVD3 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Dchs1E9PVD3 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC14.43□□□□□ -0.1
Dchs1E9PVD3 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC14.43□□□□□ -0.1
Dchs1E9PVD3 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Dchs1E9PVD3 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Dchs1E9PVD3 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Dchs1E9PVD3 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Dchs1E9PVD3 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Dchs1E9PVD3 Mir8117-201ENSMUST00000184773 107 ntBASIC14.42□□□□□ -0.1
Dchs1E9PVD3 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Dchs1E9PVD3 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Dchs1E9PVD3 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC14.42□□□□□ -0.1
Dchs1E9PVD3 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Dchs1E9PVD3 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Dchs1E9PVD3 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Dchs1E9PVD3 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Dchs1E9PVD3 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Dchs1E9PVD3 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Dchs1E9PVD3 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Dchs1E9PVD3 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Dchs1E9PVD3 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Dchs1E9PVD3 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Dchs1E9PVD3 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Dchs1E9PVD3 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Dchs1E9PVD3 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Dchs1E9PVD3 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Dchs1E9PVD3 Gm26596-201ENSMUST00000180464 2655 ntBASIC14.42□□□□□ -0.1
Dchs1E9PVD3 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Dchs1E9PVD3 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC14.41□□□□□ -0.1
Dchs1E9PVD3 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Dchs1E9PVD3 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Dchs1E9PVD3 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Dchs1E9PVD3 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Dchs1E9PVD3 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Dchs1E9PVD3 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC14.41□□□□□ -0.1
Dchs1E9PVD3 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC14.41□□□□□ -0.1
Dchs1E9PVD3 AC139382.1-201ENSMUST00000221402 498 ntBASIC14.41□□□□□ -0.1
Dchs1E9PVD3 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Dchs1E9PVD3 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Dchs1E9PVD3 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Dchs1E9PVD3 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Dchs1E9PVD3 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Dchs1E9PVD3 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC14.41□□□□□ -0.1
Dchs1E9PVD3 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Dchs1E9PVD3 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Dchs1E9PVD3 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC14.41□□□□□ -0.1
Dchs1E9PVD3 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Dchs1E9PVD3 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Dchs1E9PVD3 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Dchs1E9PVD3 Gm44872-201ENSMUST00000207864 420 ntBASIC14.4□□□□□ -0.1
Dchs1E9PVD3 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC14.4□□□□□ -0.1
Dchs1E9PVD3 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
Dchs1E9PVD3 Gm9889-202ENSMUST00000206983 1577 ntBASIC14.4□□□□□ -0.1
Dchs1E9PVD3 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Dchs1E9PVD3 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Dchs1E9PVD3 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Dchs1E9PVD3 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
Dchs1E9PVD3 Gm20949-201ENSMUST00000206478 952 ntBASIC14.4□□□□□ -0.1
Dchs1E9PVD3 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Dchs1E9PVD3 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Dchs1E9PVD3 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Dchs1E9PVD3 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Dchs1E9PVD3 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Dchs1E9PVD3 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Dchs1E9PVD3 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Dchs1E9PVD3 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Dchs1E9PVD3 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
Dchs1E9PVD3 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Dchs1E9PVD3 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Dchs1E9PVD3 Gfra2-202ENSMUST00000227633 1480 ntBASIC14.4□□□□□ -0.1
Dchs1E9PVD3 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Dchs1E9PVD3 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC14.4□□□□□ -0.1
Dchs1E9PVD3 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Dchs1E9PVD3 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC14.4□□□□□ -0.1
Dchs1E9PVD3 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Dchs1E9PVD3 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Dchs1E9PVD3 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Dchs1E9PVD3 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Dchs1E9PVD3 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Dchs1E9PVD3 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC14.39□□□□□ -0.11
Dchs1E9PVD3 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Dchs1E9PVD3 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Dchs1E9PVD3 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Dchs1E9PVD3 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Dchs1E9PVD3 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC14.39□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 44.4 ms