Protein–RNA interactions for Protein: D3YZU1

Shank1, SH3 and multiple ankyrin repeat domains protein 1, mousemouse

Predictions only

Length 2,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1D3YZU1 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
Shank1D3YZU1 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Shank1D3YZU1 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Shank1D3YZU1 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Shank1D3YZU1 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Shank1D3YZU1 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
Shank1D3YZU1 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Shank1D3YZU1 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Shank1D3YZU1 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Shank1D3YZU1 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Shank1D3YZU1 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Shank1D3YZU1 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Shank1D3YZU1 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC14.63□□□□□ -0.07
Shank1D3YZU1 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
Shank1D3YZU1 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Shank1D3YZU1 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Shank1D3YZU1 AC151286.1-201ENSMUST00000198489 145 ntBASIC14.63□□□□□ -0.07
Shank1D3YZU1 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
Shank1D3YZU1 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Shank1D3YZU1 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Shank1D3YZU1 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Shank1D3YZU1 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Shank1D3YZU1 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Shank1D3YZU1 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Shank1D3YZU1 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Shank1D3YZU1 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Shank1D3YZU1 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Shank1D3YZU1 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Shank1D3YZU1 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Shank1D3YZU1 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Shank1D3YZU1 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Shank1D3YZU1 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Shank1D3YZU1 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Shank1D3YZU1 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Shank1D3YZU1 Gm8349-201ENSMUST00000182720 1003 ntBASIC14.62□□□□□ -0.07
Shank1D3YZU1 Gm45683-201ENSMUST00000210825 1247 ntBASIC14.62□□□□□ -0.07
Shank1D3YZU1 Gm15442-201ENSMUST00000117905 1527 ntBASIC14.62□□□□□ -0.07
Shank1D3YZU1 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Shank1D3YZU1 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Shank1D3YZU1 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Shank1D3YZU1 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Shank1D3YZU1 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Shank1D3YZU1 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Shank1D3YZU1 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Shank1D3YZU1 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Shank1D3YZU1 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Shank1D3YZU1 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Shank1D3YZU1 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Shank1D3YZU1 Gm4459-201ENSMUST00000118750 468 ntBASIC14.61□□□□□ -0.07
Shank1D3YZU1 Gm37584-201ENSMUST00000193595 1290 ntBASIC14.61□□□□□ -0.07
Shank1D3YZU1 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC14.61□□□□□ -0.07
Shank1D3YZU1 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Shank1D3YZU1 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Shank1D3YZU1 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Shank1D3YZU1 AL590614.2-201ENSMUST00000225374 1937 ntBASIC14.61□□□□□ -0.07
Shank1D3YZU1 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Shank1D3YZU1 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Shank1D3YZU1 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Shank1D3YZU1 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Shank1D3YZU1 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Shank1D3YZU1 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Shank1D3YZU1 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Shank1D3YZU1 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC14.61□□□□□ -0.07
Shank1D3YZU1 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC14.61□□□□□ -0.07
Shank1D3YZU1 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Shank1D3YZU1 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Shank1D3YZU1 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Shank1D3YZU1 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Shank1D3YZU1 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Shank1D3YZU1 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC14.6□□□□□ -0.07
Shank1D3YZU1 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Shank1D3YZU1 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Shank1D3YZU1 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC14.6□□□□□ -0.07
Shank1D3YZU1 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Shank1D3YZU1 Ndufaf2-202ENSMUST00000223734 556 ntBASIC14.6□□□□□ -0.07
Shank1D3YZU1 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC14.6□□□□□ -0.07
Shank1D3YZU1 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Shank1D3YZU1 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC14.6□□□□□ -0.07
Shank1D3YZU1 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Shank1D3YZU1 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Shank1D3YZU1 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Shank1D3YZU1 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC14.6□□□□□ -0.07
Shank1D3YZU1 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Shank1D3YZU1 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC14.6□□□□□ -0.07
Shank1D3YZU1 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Shank1D3YZU1 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Shank1D3YZU1 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Shank1D3YZU1 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Shank1D3YZU1 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Shank1D3YZU1 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Shank1D3YZU1 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Shank1D3YZU1 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Shank1D3YZU1 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Shank1D3YZU1 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC14.6□□□□□ -0.07
Shank1D3YZU1 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Shank1D3YZU1 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC14.6□□□□□ -0.07
Shank1D3YZU1 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC14.6□□□□□ -0.07
Shank1D3YZU1 Gm7507-201ENSMUST00000183053 1008 ntBASIC14.6□□□□□ -0.07
Shank1D3YZU1 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Shank1D3YZU1 Chchd1-203ENSMUST00000224633 557 ntBASIC14.6□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms