Protein–RNA interactions for Protein: B2RVW2

Clrn2, Clarin 2, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn2B2RVW2 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Clrn2B2RVW2 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC18.94■□□□□ 0.62
Clrn2B2RVW2 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Clrn2B2RVW2 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Clrn2B2RVW2 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
Clrn2B2RVW2 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC18.93■□□□□ 0.62
Clrn2B2RVW2 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Clrn2B2RVW2 Gm37500-201ENSMUST00000192059 1443 ntBASIC18.93■□□□□ 0.62
Clrn2B2RVW2 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Clrn2B2RVW2 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC18.93■□□□□ 0.62
Clrn2B2RVW2 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC18.93■□□□□ 0.62
Clrn2B2RVW2 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Clrn2B2RVW2 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC18.93■□□□□ 0.62
Clrn2B2RVW2 Gm27628-201ENSMUST00000184911 107 ntBASIC18.93■□□□□ 0.62
Clrn2B2RVW2 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC18.93■□□□□ 0.62
Clrn2B2RVW2 AC154757.1-201ENSMUST00000228289 336 ntBASIC18.93■□□□□ 0.62
Clrn2B2RVW2 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Clrn2B2RVW2 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Clrn2B2RVW2 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Clrn2B2RVW2 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Clrn2B2RVW2 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Clrn2B2RVW2 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Clrn2B2RVW2 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Clrn2B2RVW2 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Clrn2B2RVW2 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Clrn2B2RVW2 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Clrn2B2RVW2 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Clrn2B2RVW2 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Clrn2B2RVW2 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Clrn2B2RVW2 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Clrn2B2RVW2 Gm4995-201ENSMUST00000117247 432 ntBASIC18.92■□□□□ 0.62
Clrn2B2RVW2 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Clrn2B2RVW2 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC18.92■□□□□ 0.62
Clrn2B2RVW2 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Clrn2B2RVW2 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Clrn2B2RVW2 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Clrn2B2RVW2 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Clrn2B2RVW2 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Clrn2B2RVW2 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Clrn2B2RVW2 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Clrn2B2RVW2 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC18.92■□□□□ 0.62
Clrn2B2RVW2 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
Clrn2B2RVW2 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Clrn2B2RVW2 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Clrn2B2RVW2 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Clrn2B2RVW2 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC18.91■□□□□ 0.62
Clrn2B2RVW2 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Clrn2B2RVW2 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC18.91■□□□□ 0.62
Clrn2B2RVW2 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Clrn2B2RVW2 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Clrn2B2RVW2 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC18.91■□□□□ 0.62
Clrn2B2RVW2 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Clrn2B2RVW2 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Clrn2B2RVW2 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC18.91■□□□□ 0.62
Clrn2B2RVW2 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Clrn2B2RVW2 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Clrn2B2RVW2 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Clrn2B2RVW2 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Clrn2B2RVW2 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC18.91■□□□□ 0.62
Clrn2B2RVW2 Gm13036-201ENSMUST00000117799 748 ntBASIC18.91■□□□□ 0.62
Clrn2B2RVW2 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC18.91■□□□□ 0.62
Clrn2B2RVW2 Gm43935-201ENSMUST00000203569 1050 ntBASIC18.91■□□□□ 0.62
Clrn2B2RVW2 CT943659.1-201ENSMUST00000215459 326 ntBASIC18.91■□□□□ 0.62
Clrn2B2RVW2 Gm8655-201ENSMUST00000221159 852 ntBASIC18.91■□□□□ 0.62
Clrn2B2RVW2 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Clrn2B2RVW2 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Clrn2B2RVW2 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Clrn2B2RVW2 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Clrn2B2RVW2 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Clrn2B2RVW2 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Clrn2B2RVW2 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Clrn2B2RVW2 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Clrn2B2RVW2 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Clrn2B2RVW2 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Clrn2B2RVW2 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Clrn2B2RVW2 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC18.9■□□□□ 0.62
Clrn2B2RVW2 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Clrn2B2RVW2 Gm14494-201ENSMUST00000118786 435 ntBASIC18.9■□□□□ 0.62
Clrn2B2RVW2 Gm14140-201ENSMUST00000119999 995 ntBASIC18.9■□□□□ 0.62
Clrn2B2RVW2 Gm6184-201ENSMUST00000120403 1261 ntBASIC18.9■□□□□ 0.62
Clrn2B2RVW2 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Clrn2B2RVW2 Gm43575-201ENSMUST00000196420 516 ntBASIC18.9■□□□□ 0.62
Clrn2B2RVW2 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Clrn2B2RVW2 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Clrn2B2RVW2 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Clrn2B2RVW2 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Clrn2B2RVW2 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Clrn2B2RVW2 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Clrn2B2RVW2 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Clrn2B2RVW2 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Clrn2B2RVW2 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC18.9■□□□□ 0.62
Clrn2B2RVW2 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Clrn2B2RVW2 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Clrn2B2RVW2 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC18.9■□□□□ 0.62
Clrn2B2RVW2 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Clrn2B2RVW2 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC18.9■□□□□ 0.62
Clrn2B2RVW2 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
Clrn2B2RVW2 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Clrn2B2RVW2 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Clrn2B2RVW2 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms