Protein–RNA interactions for Protein: B2RQC2

Usp42, Ubiquitin carboxyl-terminal hydrolase 42, mousemouse

Known RBP Predictions only

Length 1,324 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp42B2RQC2 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Usp42B2RQC2 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Usp42B2RQC2 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Usp42B2RQC2 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Usp42B2RQC2 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Usp42B2RQC2 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Usp42B2RQC2 Olfr129-201ENSMUST00000122318 993 ntBASIC19.16■□□□□ 0.66
Usp42B2RQC2 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC19.16■□□□□ 0.66
Usp42B2RQC2 Gm27742-201ENSMUST00000184667 60 ntBASIC19.16■□□□□ 0.66
Usp42B2RQC2 Gm27704-201ENSMUST00000185094 107 ntBASIC19.16■□□□□ 0.66
Usp42B2RQC2 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Usp42B2RQC2 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Usp42B2RQC2 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Usp42B2RQC2 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Usp42B2RQC2 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Usp42B2RQC2 Gm9954-202ENSMUST00000198686 4725 ntBASIC19.16■□□□□ 0.66
Usp42B2RQC2 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Usp42B2RQC2 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Usp42B2RQC2 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Usp42B2RQC2 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Usp42B2RQC2 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Usp42B2RQC2 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Usp42B2RQC2 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Usp42B2RQC2 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Usp42B2RQC2 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Usp42B2RQC2 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Usp42B2RQC2 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Usp42B2RQC2 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Usp42B2RQC2 CT009713.7-201ENSMUST00000224689 571 ntBASIC19.15■□□□□ 0.66
Usp42B2RQC2 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Usp42B2RQC2 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Usp42B2RQC2 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Usp42B2RQC2 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Usp42B2RQC2 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Usp42B2RQC2 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Usp42B2RQC2 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Usp42B2RQC2 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Usp42B2RQC2 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
Usp42B2RQC2 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Usp42B2RQC2 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Usp42B2RQC2 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
Usp42B2RQC2 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC19.14■□□□□ 0.65
Usp42B2RQC2 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Usp42B2RQC2 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Usp42B2RQC2 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Usp42B2RQC2 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Usp42B2RQC2 Gm7284-201ENSMUST00000131667 944 ntBASIC19.14■□□□□ 0.65
Usp42B2RQC2 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Usp42B2RQC2 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC19.14■□□□□ 0.65
Usp42B2RQC2 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC19.14■□□□□ 0.65
Usp42B2RQC2 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Usp42B2RQC2 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC19.14■□□□□ 0.65
Usp42B2RQC2 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Usp42B2RQC2 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Usp42B2RQC2 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Usp42B2RQC2 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Usp42B2RQC2 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Usp42B2RQC2 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC19.13■□□□□ 0.65
Usp42B2RQC2 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Usp42B2RQC2 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC19.13■□□□□ 0.65
Usp42B2RQC2 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Usp42B2RQC2 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Usp42B2RQC2 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC19.13■□□□□ 0.65
Usp42B2RQC2 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Usp42B2RQC2 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Usp42B2RQC2 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Usp42B2RQC2 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Usp42B2RQC2 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Usp42B2RQC2 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC19.13■□□□□ 0.65
Usp42B2RQC2 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Usp42B2RQC2 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Usp42B2RQC2 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Usp42B2RQC2 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC19.12■□□□□ 0.65
Usp42B2RQC2 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Usp42B2RQC2 Gm45412-201ENSMUST00000210217 2275 ntBASIC19.12■□□□□ 0.65
Usp42B2RQC2 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Usp42B2RQC2 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC19.12■□□□□ 0.65
Usp42B2RQC2 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Usp42B2RQC2 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Usp42B2RQC2 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Usp42B2RQC2 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC19.12■□□□□ 0.65
Usp42B2RQC2 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Usp42B2RQC2 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Usp42B2RQC2 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC19.12■□□□□ 0.65
Usp42B2RQC2 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Usp42B2RQC2 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Usp42B2RQC2 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Usp42B2RQC2 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Usp42B2RQC2 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Usp42B2RQC2 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Usp42B2RQC2 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Usp42B2RQC2 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Usp42B2RQC2 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Usp42B2RQC2 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
Usp42B2RQC2 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Usp42B2RQC2 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Usp42B2RQC2 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Usp42B2RQC2 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Usp42B2RQC2 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Usp42B2RQC2 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms