Protein–RNA interactions for Protein: B1AUC4

Ube2u, Ubiquitin-conjugating enzyme E2U (putative), mousemouse

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube2uB1AUC4 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
Ube2uB1AUC4 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Ube2uB1AUC4 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC24.37■■□□□ 1.49
Ube2uB1AUC4 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC24.37■■□□□ 1.49
Ube2uB1AUC4 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Ube2uB1AUC4 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
Ube2uB1AUC4 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Ube2uB1AUC4 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Ube2uB1AUC4 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
Ube2uB1AUC4 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC24.37■■□□□ 1.49
Ube2uB1AUC4 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Ube2uB1AUC4 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Ube2uB1AUC4 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC24.36■■□□□ 1.49
Ube2uB1AUC4 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Ube2uB1AUC4 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC24.36■■□□□ 1.49
Ube2uB1AUC4 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC24.36■■□□□ 1.49
Ube2uB1AUC4 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC24.36■■□□□ 1.49
Ube2uB1AUC4 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC24.36■■□□□ 1.49
Ube2uB1AUC4 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC24.36■■□□□ 1.49
Ube2uB1AUC4 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Ube2uB1AUC4 Spr-ps1-201ENSMUST00000089584 605 ntBASIC24.36■■□□□ 1.49
Ube2uB1AUC4 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC24.36■■□□□ 1.49
Ube2uB1AUC4 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC24.36■■□□□ 1.49
Ube2uB1AUC4 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC24.36■■□□□ 1.49
Ube2uB1AUC4 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC24.36■■□□□ 1.49
Ube2uB1AUC4 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Ube2uB1AUC4 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Ube2uB1AUC4 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
Ube2uB1AUC4 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
Ube2uB1AUC4 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Ube2uB1AUC4 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC24.35■■□□□ 1.49
Ube2uB1AUC4 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC24.35■■□□□ 1.49
Ube2uB1AUC4 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
Ube2uB1AUC4 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC24.35■■□□□ 1.49
Ube2uB1AUC4 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Ube2uB1AUC4 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
Ube2uB1AUC4 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Ube2uB1AUC4 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Ube2uB1AUC4 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Ube2uB1AUC4 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
Ube2uB1AUC4 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC24.34■■□□□ 1.49
Ube2uB1AUC4 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
Ube2uB1AUC4 Gm7153-201ENSMUST00000117092 455 ntBASIC24.34■■□□□ 1.49
Ube2uB1AUC4 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC24.34■■□□□ 1.49
Ube2uB1AUC4 Umpk-ps-201ENSMUST00000211897 827 ntBASIC24.34■■□□□ 1.49
Ube2uB1AUC4 AC125350.1-201ENSMUST00000225115 903 ntBASIC24.34■■□□□ 1.49
Ube2uB1AUC4 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Ube2uB1AUC4 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC24.34■■□□□ 1.49
Ube2uB1AUC4 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
Ube2uB1AUC4 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
Ube2uB1AUC4 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Ube2uB1AUC4 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC24.34■■□□□ 1.49
Ube2uB1AUC4 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Ube2uB1AUC4 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC24.34■■□□□ 1.49
Ube2uB1AUC4 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Ube2uB1AUC4 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC24.34■■□□□ 1.49
Ube2uB1AUC4 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Ube2uB1AUC4 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC24.33■■□□□ 1.49
Ube2uB1AUC4 Gm11620-201ENSMUST00000118770 1845 ntBASIC24.33■■□□□ 1.49
Ube2uB1AUC4 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC24.33■■□□□ 1.49
Ube2uB1AUC4 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC24.33■■□□□ 1.49
Ube2uB1AUC4 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
Ube2uB1AUC4 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC24.33■■□□□ 1.49
Ube2uB1AUC4 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
Ube2uB1AUC4 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC24.33■■□□□ 1.49
Ube2uB1AUC4 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC24.33■■□□□ 1.49
Ube2uB1AUC4 AC124569.2-201ENSMUST00000225998 818 ntBASIC24.33■■□□□ 1.49
Ube2uB1AUC4 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Ube2uB1AUC4 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC24.33■■□□□ 1.49
Ube2uB1AUC4 Gm7461-201ENSMUST00000058918 827 ntBASIC24.33■■□□□ 1.49
Ube2uB1AUC4 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Ube2uB1AUC4 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC24.33■■□□□ 1.49
Ube2uB1AUC4 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Ube2uB1AUC4 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.48
Ube2uB1AUC4 Gm43338-201ENSMUST00000198617 2223 ntBASIC24.33■■□□□ 1.48
Ube2uB1AUC4 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC24.33■■□□□ 1.48
Ube2uB1AUC4 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC24.32■■□□□ 1.48
Ube2uB1AUC4 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
Ube2uB1AUC4 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC24.32■■□□□ 1.48
Ube2uB1AUC4 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Ube2uB1AUC4 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Ube2uB1AUC4 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
Ube2uB1AUC4 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Ube2uB1AUC4 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Ube2uB1AUC4 Gm24589-201ENSMUST00000116692 94 ntBASIC24.32■■□□□ 1.48
Ube2uB1AUC4 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC24.32■■□□□ 1.48
Ube2uB1AUC4 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC24.32■■□□□ 1.48
Ube2uB1AUC4 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Ube2uB1AUC4 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
Ube2uB1AUC4 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Ube2uB1AUC4 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC24.32■■□□□ 1.48
Ube2uB1AUC4 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Ube2uB1AUC4 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC24.32■■□□□ 1.48
Ube2uB1AUC4 2810454H06Rik-201ENSMUST00000189942 3148 ntBASIC24.32■■□□□ 1.48
Ube2uB1AUC4 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC24.32■■□□□ 1.48
Ube2uB1AUC4 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC24.32■■□□□ 1.48
Ube2uB1AUC4 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC24.31■■□□□ 1.48
Ube2uB1AUC4 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC24.31■■□□□ 1.48
Ube2uB1AUC4 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC24.31■■□□□ 1.48
Ube2uB1AUC4 Gm10052-201ENSMUST00000168019 960 ntBASIC24.31■■□□□ 1.48
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms