Protein–RNA interactions for Protein: A6H584

Col6a5, Collagen alpha-5(VI) chain, mousemouse

Predictions only

Length 2,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a5A6H584 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Col6a5A6H584 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Col6a5A6H584 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Col6a5A6H584 Best4-ps-201ENSMUST00000129783 1380 ntBASIC12.33□□□□□ -0.44
Col6a5A6H584 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Col6a5A6H584 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC12.33□□□□□ -0.44
Col6a5A6H584 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC12.33□□□□□ -0.44
Col6a5A6H584 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Col6a5A6H584 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Col6a5A6H584 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Col6a5A6H584 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Col6a5A6H584 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Col6a5A6H584 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Col6a5A6H584 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Col6a5A6H584 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Col6a5A6H584 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Col6a5A6H584 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC12.32□□□□□ -0.44
Col6a5A6H584 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Col6a5A6H584 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Col6a5A6H584 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Col6a5A6H584 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC12.32□□□□□ -0.44
Col6a5A6H584 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Col6a5A6H584 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC12.32□□□□□ -0.44
Col6a5A6H584 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Col6a5A6H584 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Col6a5A6H584 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Col6a5A6H584 Gm12892-201ENSMUST00000117367 1146 ntBASIC12.32□□□□□ -0.44
Col6a5A6H584 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC12.32□□□□□ -0.44
Col6a5A6H584 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Col6a5A6H584 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Col6a5A6H584 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Col6a5A6H584 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Col6a5A6H584 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Col6a5A6H584 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC12.32□□□□□ -0.44
Col6a5A6H584 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Col6a5A6H584 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Col6a5A6H584 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Col6a5A6H584 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC12.31□□□□□ -0.44
Col6a5A6H584 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC12.31□□□□□ -0.44
Col6a5A6H584 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Col6a5A6H584 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Col6a5A6H584 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Col6a5A6H584 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Col6a5A6H584 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Col6a5A6H584 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Col6a5A6H584 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC12.31□□□□□ -0.44
Col6a5A6H584 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC12.31□□□□□ -0.44
Col6a5A6H584 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Col6a5A6H584 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Col6a5A6H584 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC12.31□□□□□ -0.44
Col6a5A6H584 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Col6a5A6H584 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Col6a5A6H584 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Col6a5A6H584 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC12.31□□□□□ -0.44
Col6a5A6H584 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC12.31□□□□□ -0.44
Col6a5A6H584 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Col6a5A6H584 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Col6a5A6H584 Gm17837-201ENSMUST00000186435 985 ntBASIC12.31□□□□□ -0.44
Col6a5A6H584 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Col6a5A6H584 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Col6a5A6H584 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Col6a5A6H584 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Col6a5A6H584 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Col6a5A6H584 AC159621.2-201ENSMUST00000223519 1326 ntBASIC12.31□□□□□ -0.44
Col6a5A6H584 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Col6a5A6H584 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Col6a5A6H584 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Col6a5A6H584 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Col6a5A6H584 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Col6a5A6H584 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Col6a5A6H584 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Col6a5A6H584 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Col6a5A6H584 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC12.3□□□□□ -0.44
Col6a5A6H584 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Col6a5A6H584 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Col6a5A6H584 Gm10616-201ENSMUST00000205285 2127 ntBASIC12.3□□□□□ -0.44
Col6a5A6H584 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Col6a5A6H584 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Col6a5A6H584 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Col6a5A6H584 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Col6a5A6H584 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC12.3□□□□□ -0.44
Col6a5A6H584 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Col6a5A6H584 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Col6a5A6H584 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Col6a5A6H584 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Col6a5A6H584 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Col6a5A6H584 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Col6a5A6H584 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Col6a5A6H584 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Col6a5A6H584 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Col6a5A6H584 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Col6a5A6H584 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Col6a5A6H584 Gm35558-201ENSMUST00000222675 2219 ntBASIC12.29□□□□□ -0.44
Col6a5A6H584 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Col6a5A6H584 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC12.29□□□□□ -0.44
Col6a5A6H584 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Col6a5A6H584 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Col6a5A6H584 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Col6a5A6H584 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC12.29□□□□□ -0.44
Col6a5A6H584 Gfra2-202ENSMUST00000227633 1480 ntBASIC12.29□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms