Protein–RNA interactions for Protein: A2APX8

Scn1a, Sodium channel protein type 1 subunit alpha, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1aA2APX8 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Scn1aA2APX8 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
Scn1aA2APX8 Mir6404-201ENSMUST00000183699 94 ntBASIC17.11■□□□□ 0.33
Scn1aA2APX8 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Scn1aA2APX8 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Scn1aA2APX8 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Scn1aA2APX8 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Scn1aA2APX8 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Scn1aA2APX8 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Scn1aA2APX8 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Scn1aA2APX8 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Scn1aA2APX8 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Scn1aA2APX8 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Scn1aA2APX8 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Scn1aA2APX8 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Scn1aA2APX8 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Scn1aA2APX8 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Scn1aA2APX8 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Scn1aA2APX8 Gm12497-201ENSMUST00000138778 237 ntBASIC17.11■□□□□ 0.33
Scn1aA2APX8 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC17.11■□□□□ 0.33
Scn1aA2APX8 AC115863.1-201ENSMUST00000214815 1813 ntBASIC17.11■□□□□ 0.33
Scn1aA2APX8 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Scn1aA2APX8 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Scn1aA2APX8 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Scn1aA2APX8 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Scn1aA2APX8 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Scn1aA2APX8 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Scn1aA2APX8 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Scn1aA2APX8 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Scn1aA2APX8 Gm4459-201ENSMUST00000118750 468 ntBASIC17.1■□□□□ 0.33
Scn1aA2APX8 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC17.1■□□□□ 0.33
Scn1aA2APX8 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC17.1■□□□□ 0.33
Scn1aA2APX8 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC17.1■□□□□ 0.33
Scn1aA2APX8 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Scn1aA2APX8 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Scn1aA2APX8 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Scn1aA2APX8 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Scn1aA2APX8 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Scn1aA2APX8 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Scn1aA2APX8 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Scn1aA2APX8 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Scn1aA2APX8 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC17.09■□□□□ 0.33
Scn1aA2APX8 Mir8098-201ENSMUST00000184011 137 ntBASIC17.09■□□□□ 0.33
Scn1aA2APX8 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC17.09■□□□□ 0.33
Scn1aA2APX8 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC17.09■□□□□ 0.33
Scn1aA2APX8 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Scn1aA2APX8 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Scn1aA2APX8 Gm45244-201ENSMUST00000211328 2200 ntBASIC17.09■□□□□ 0.33
Scn1aA2APX8 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Scn1aA2APX8 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Scn1aA2APX8 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC17.09■□□□□ 0.33
Scn1aA2APX8 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC17.09■□□□□ 0.33
Scn1aA2APX8 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC17.09■□□□□ 0.33
Scn1aA2APX8 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Scn1aA2APX8 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Scn1aA2APX8 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Scn1aA2APX8 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Scn1aA2APX8 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Scn1aA2APX8 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Scn1aA2APX8 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Scn1aA2APX8 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC17.08■□□□□ 0.33
Scn1aA2APX8 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Scn1aA2APX8 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Scn1aA2APX8 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Scn1aA2APX8 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Scn1aA2APX8 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Scn1aA2APX8 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC17.08■□□□□ 0.33
Scn1aA2APX8 Gm13830-205ENSMUST00000201195 1155 ntBASIC17.08■□□□□ 0.33
Scn1aA2APX8 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
Scn1aA2APX8 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Scn1aA2APX8 Rps4l-201ENSMUST00000071745 943 ntBASIC17.08■□□□□ 0.33
Scn1aA2APX8 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC17.08■□□□□ 0.33
Scn1aA2APX8 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Scn1aA2APX8 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Scn1aA2APX8 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC17.08■□□□□ 0.32
Scn1aA2APX8 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Scn1aA2APX8 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Scn1aA2APX8 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Scn1aA2APX8 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Scn1aA2APX8 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.32
Scn1aA2APX8 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Scn1aA2APX8 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Scn1aA2APX8 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Scn1aA2APX8 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Scn1aA2APX8 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Scn1aA2APX8 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Scn1aA2APX8 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Scn1aA2APX8 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Scn1aA2APX8 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Scn1aA2APX8 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Scn1aA2APX8 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Scn1aA2APX8 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Scn1aA2APX8 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Scn1aA2APX8 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Scn1aA2APX8 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Scn1aA2APX8 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC17.07■□□□□ 0.32
Scn1aA2APX8 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Scn1aA2APX8 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Scn1aA2APX8 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC17.06■□□□□ 0.32
Scn1aA2APX8 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 44.5 ms