Protein–RNA interactions for Protein: A0A504

Smim17, MCG116182, isoform CRA_b, mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim17A0A504 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Smim17A0A504 AL590614.2-201ENSMUST00000225374 1937 ntBASIC14.92□□□□□ -0.02
Smim17A0A504 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Smim17A0A504 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Smim17A0A504 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Smim17A0A504 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Smim17A0A504 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Smim17A0A504 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Smim17A0A504 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Smim17A0A504 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Smim17A0A504 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC14.92□□□□□ -0.02
Smim17A0A504 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Smim17A0A504 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Smim17A0A504 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Smim17A0A504 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Smim17A0A504 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Smim17A0A504 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Smim17A0A504 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Smim17A0A504 Gm42473-201ENSMUST00000201056 2291 ntBASIC14.91□□□□□ -0.02
Smim17A0A504 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Smim17A0A504 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Smim17A0A504 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Smim17A0A504 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Smim17A0A504 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Smim17A0A504 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Smim17A0A504 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Smim17A0A504 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Smim17A0A504 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Smim17A0A504 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Smim17A0A504 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC14.91□□□□□ -0.02
Smim17A0A504 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
Smim17A0A504 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Smim17A0A504 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Smim17A0A504 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
Smim17A0A504 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Smim17A0A504 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Smim17A0A504 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Smim17A0A504 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC14.91□□□□□ -0.02
Smim17A0A504 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Smim17A0A504 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Smim17A0A504 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Smim17A0A504 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Smim17A0A504 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Smim17A0A504 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Smim17A0A504 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Smim17A0A504 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Smim17A0A504 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Smim17A0A504 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Smim17A0A504 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Smim17A0A504 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Smim17A0A504 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Smim17A0A504 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Smim17A0A504 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Smim17A0A504 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC14.9□□□□□ -0.02
Smim17A0A504 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Smim17A0A504 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Smim17A0A504 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Smim17A0A504 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Smim17A0A504 Gm45605-201ENSMUST00000210265 4269 ntBASIC14.9□□□□□ -0.02
Smim17A0A504 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Smim17A0A504 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Smim17A0A504 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC14.9□□□□□ -0.02
Smim17A0A504 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Smim17A0A504 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Smim17A0A504 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC14.9□□□□□ -0.02
Smim17A0A504 App-207ENSMUST00000227737 2827 ntBASIC14.9□□□□□ -0.02
Smim17A0A504 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Smim17A0A504 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC14.9□□□□□ -0.02
Smim17A0A504 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Smim17A0A504 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Smim17A0A504 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Smim17A0A504 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Smim17A0A504 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC14.89□□□□□ -0.03
Smim17A0A504 Gm10676-201ENSMUST00000098778 3221 ntBASIC14.89□□□□□ -0.03
Smim17A0A504 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC14.89□□□□□ -0.03
Smim17A0A504 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Smim17A0A504 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC14.89□□□□□ -0.03
Smim17A0A504 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Smim17A0A504 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Smim17A0A504 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Smim17A0A504 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC14.89□□□□□ -0.03
Smim17A0A504 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
Smim17A0A504 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
Smim17A0A504 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Smim17A0A504 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Smim17A0A504 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Smim17A0A504 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Smim17A0A504 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Smim17A0A504 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Smim17A0A504 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC14.89□□□□□ -0.03
Smim17A0A504 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC14.89□□□□□ -0.03
Smim17A0A504 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Smim17A0A504 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC14.88□□□□□ -0.03
Smim17A0A504 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Smim17A0A504 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Smim17A0A504 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
Smim17A0A504 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Smim17A0A504 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Smim17A0A504 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Smim17A0A504 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms