Protein–RNA interactions for Protein: A0A140LIT1

Ccdc194, Coiled-coil domain-containing protein 194, mousemouse

Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc194A0A140LIT1 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Ccdc194A0A140LIT1 Gfra2-202ENSMUST00000227633 1480 ntBASIC16.32■□□□□ 0.2
Ccdc194A0A140LIT1 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ccdc194A0A140LIT1 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ccdc194A0A140LIT1 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ccdc194A0A140LIT1 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ccdc194A0A140LIT1 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Ccdc194A0A140LIT1 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ccdc194A0A140LIT1 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ccdc194A0A140LIT1 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ccdc194A0A140LIT1 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC16.32■□□□□ 0.2
Ccdc194A0A140LIT1 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ccdc194A0A140LIT1 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ccdc194A0A140LIT1 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Ccdc194A0A140LIT1 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ccdc194A0A140LIT1 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ccdc194A0A140LIT1 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ccdc194A0A140LIT1 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ccdc194A0A140LIT1 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Ccdc194A0A140LIT1 Actl10-202ENSMUST00000226583 1501 ntBASIC16.31■□□□□ 0.2
Ccdc194A0A140LIT1 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC16.31■□□□□ 0.2
Ccdc194A0A140LIT1 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Ccdc194A0A140LIT1 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
Ccdc194A0A140LIT1 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Ccdc194A0A140LIT1 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Ccdc194A0A140LIT1 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ccdc194A0A140LIT1 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC16.31■□□□□ 0.2
Ccdc194A0A140LIT1 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC16.31■□□□□ 0.2
Ccdc194A0A140LIT1 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Ccdc194A0A140LIT1 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ccdc194A0A140LIT1 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ccdc194A0A140LIT1 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ccdc194A0A140LIT1 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Ccdc194A0A140LIT1 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Ccdc194A0A140LIT1 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ccdc194A0A140LIT1 AC115863.1-201ENSMUST00000214815 1813 ntBASIC16.31■□□□□ 0.2
Ccdc194A0A140LIT1 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ccdc194A0A140LIT1 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC16.3■□□□□ 0.2
Ccdc194A0A140LIT1 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ccdc194A0A140LIT1 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ccdc194A0A140LIT1 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
Ccdc194A0A140LIT1 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Ccdc194A0A140LIT1 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC16.3■□□□□ 0.2
Ccdc194A0A140LIT1 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC16.3■□□□□ 0.2
Ccdc194A0A140LIT1 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ccdc194A0A140LIT1 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Ccdc194A0A140LIT1 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Ccdc194A0A140LIT1 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ccdc194A0A140LIT1 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ccdc194A0A140LIT1 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ccdc194A0A140LIT1 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ccdc194A0A140LIT1 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ccdc194A0A140LIT1 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Ccdc194A0A140LIT1 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ccdc194A0A140LIT1 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ccdc194A0A140LIT1 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ccdc194A0A140LIT1 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ccdc194A0A140LIT1 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ccdc194A0A140LIT1 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Ccdc194A0A140LIT1 Gm13186-201ENSMUST00000118031 316 ntBASIC16.29■□□□□ 0.2
Ccdc194A0A140LIT1 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ccdc194A0A140LIT1 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC16.29■□□□□ 0.2
Ccdc194A0A140LIT1 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ccdc194A0A140LIT1 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ccdc194A0A140LIT1 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ccdc194A0A140LIT1 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ccdc194A0A140LIT1 Gm42918-201ENSMUST00000199249 1580 ntBASIC16.29■□□□□ 0.2
Ccdc194A0A140LIT1 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Ccdc194A0A140LIT1 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ccdc194A0A140LIT1 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC16.29■□□□□ 0.2
Ccdc194A0A140LIT1 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Ccdc194A0A140LIT1 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ccdc194A0A140LIT1 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ccdc194A0A140LIT1 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ccdc194A0A140LIT1 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ccdc194A0A140LIT1 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ccdc194A0A140LIT1 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ccdc194A0A140LIT1 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ccdc194A0A140LIT1 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ccdc194A0A140LIT1 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ccdc194A0A140LIT1 Gm5417-201ENSMUST00000079706 384 ntBASIC16.28■□□□□ 0.2
Ccdc194A0A140LIT1 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ccdc194A0A140LIT1 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Ccdc194A0A140LIT1 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ccdc194A0A140LIT1 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ccdc194A0A140LIT1 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC16.28■□□□□ 0.2
Ccdc194A0A140LIT1 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ccdc194A0A140LIT1 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ccdc194A0A140LIT1 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ccdc194A0A140LIT1 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ccdc194A0A140LIT1 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ccdc194A0A140LIT1 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ccdc194A0A140LIT1 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC16.27■□□□□ 0.2
Ccdc194A0A140LIT1 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC16.27■□□□□ 0.2
Ccdc194A0A140LIT1 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ccdc194A0A140LIT1 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Ccdc194A0A140LIT1 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ccdc194A0A140LIT1 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ccdc194A0A140LIT1 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ccdc194A0A140LIT1 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 71.9 ms