Protein–RNA interactions for Protein: A0A0U1RP99

Ino80e, INO80 complex subunit E (Fragment), mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ino80eA0A0U1RP99 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ino80eA0A0U1RP99 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC13.57□□□□□ -0.24
Ino80eA0A0U1RP99 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ino80eA0A0U1RP99 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ino80eA0A0U1RP99 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ino80eA0A0U1RP99 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Ino80eA0A0U1RP99 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ino80eA0A0U1RP99 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ino80eA0A0U1RP99 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ino80eA0A0U1RP99 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ino80eA0A0U1RP99 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ino80eA0A0U1RP99 Gm43697-201ENSMUST00000199637 2581 ntBASIC13.57□□□□□ -0.24
Ino80eA0A0U1RP99 App-207ENSMUST00000227737 2827 ntBASIC13.57□□□□□ -0.24
Ino80eA0A0U1RP99 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Ino80eA0A0U1RP99 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ino80eA0A0U1RP99 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ino80eA0A0U1RP99 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ino80eA0A0U1RP99 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ino80eA0A0U1RP99 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ino80eA0A0U1RP99 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Ino80eA0A0U1RP99 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Ino80eA0A0U1RP99 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Ino80eA0A0U1RP99 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC13.56□□□□□ -0.24
Ino80eA0A0U1RP99 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ino80eA0A0U1RP99 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC13.56□□□□□ -0.24
Ino80eA0A0U1RP99 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ino80eA0A0U1RP99 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ino80eA0A0U1RP99 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ino80eA0A0U1RP99 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ino80eA0A0U1RP99 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Ino80eA0A0U1RP99 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Ino80eA0A0U1RP99 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ino80eA0A0U1RP99 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ino80eA0A0U1RP99 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Ino80eA0A0U1RP99 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC13.56□□□□□ -0.24
Ino80eA0A0U1RP99 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Ino80eA0A0U1RP99 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ino80eA0A0U1RP99 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ino80eA0A0U1RP99 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Ino80eA0A0U1RP99 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ino80eA0A0U1RP99 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ino80eA0A0U1RP99 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC13.55□□□□□ -0.24
Ino80eA0A0U1RP99 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ino80eA0A0U1RP99 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ino80eA0A0U1RP99 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ino80eA0A0U1RP99 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ino80eA0A0U1RP99 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ino80eA0A0U1RP99 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ino80eA0A0U1RP99 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ino80eA0A0U1RP99 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Ino80eA0A0U1RP99 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ino80eA0A0U1RP99 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ino80eA0A0U1RP99 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ino80eA0A0U1RP99 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC13.55□□□□□ -0.24
Ino80eA0A0U1RP99 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Ino80eA0A0U1RP99 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Ino80eA0A0U1RP99 Krt8-ps-201ENSMUST00000208495 945 ntBASIC13.55□□□□□ -0.24
Ino80eA0A0U1RP99 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ino80eA0A0U1RP99 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Ino80eA0A0U1RP99 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ino80eA0A0U1RP99 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC13.55□□□□□ -0.24
Ino80eA0A0U1RP99 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC13.55□□□□□ -0.24
Ino80eA0A0U1RP99 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ino80eA0A0U1RP99 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ino80eA0A0U1RP99 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC13.55□□□□□ -0.24
Ino80eA0A0U1RP99 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ino80eA0A0U1RP99 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Ino80eA0A0U1RP99 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Ino80eA0A0U1RP99 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ino80eA0A0U1RP99 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ino80eA0A0U1RP99 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Ino80eA0A0U1RP99 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Ino80eA0A0U1RP99 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Ino80eA0A0U1RP99 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ino80eA0A0U1RP99 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ino80eA0A0U1RP99 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ino80eA0A0U1RP99 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ino80eA0A0U1RP99 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Ino80eA0A0U1RP99 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Ino80eA0A0U1RP99 Gm7332-201ENSMUST00000118351 454 ntBASIC13.54□□□□□ -0.24
Ino80eA0A0U1RP99 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Ino80eA0A0U1RP99 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC13.54□□□□□ -0.24
Ino80eA0A0U1RP99 Gm43759-201ENSMUST00000196925 1261 ntBASIC13.54□□□□□ -0.24
Ino80eA0A0U1RP99 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ino80eA0A0U1RP99 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ino80eA0A0U1RP99 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ino80eA0A0U1RP99 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ino80eA0A0U1RP99 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC13.54□□□□□ -0.24
Ino80eA0A0U1RP99 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ino80eA0A0U1RP99 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ino80eA0A0U1RP99 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC13.54□□□□□ -0.24
Ino80eA0A0U1RP99 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ino80eA0A0U1RP99 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Ino80eA0A0U1RP99 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Ino80eA0A0U1RP99 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ino80eA0A0U1RP99 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Ino80eA0A0U1RP99 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ino80eA0A0U1RP99 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ino80eA0A0U1RP99 Gm38058-201ENSMUST00000194323 4368 ntBASIC13.53□□□□□ -0.24
Ino80eA0A0U1RP99 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC13.53□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms