Protein–RNA interactions for Protein: A0A0G2JGQ7

Trav15d-2-dv6d-2, T cell receptor alpha variable 15D-2-DV6D-2 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15d-2-dv6d-2A0A0G2JGQ7 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC14.36□□□□□ -0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC14.36□□□□□ -0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC14.36□□□□□ -0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC14.35□□□□□ -0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC14.35□□□□□ -0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC14.35□□□□□ -0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC14.35□□□□□ -0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC14.35□□□□□ -0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC14.34□□□□□ -0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC14.34□□□□□ -0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC14.34□□□□□ -0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm18421-201ENSMUST00000204122 625 ntBASIC14.34□□□□□ -0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm5417-201ENSMUST00000079706 384 ntBASIC14.34□□□□□ -0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Spsb2-203ENSMUST00000112473 1322 ntBASIC14.34□□□□□ -0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC14.34□□□□□ -0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 AC093043.3-201ENSMUST00000226531 2273 ntBASIC14.34□□□□□ -0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 CT010478.1-201ENSMUST00000220747 2787 ntBASIC14.34□□□□□ -0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Trav15d-2-dv6d-2A0A0G2JGQ7 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC14.33□□□□□ -0.12
Trav15d-2-dv6d-2A0A0G2JGQ7 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC14.33□□□□□ -0.12
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC14.33□□□□□ -0.12
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Trav15d-2-dv6d-2A0A0G2JGQ7 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav15d-2-dv6d-2A0A0G2JGQ7 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav15d-2-dv6d-2A0A0G2JGQ7 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav15d-2-dv6d-2A0A0G2JGQ7 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Trav15d-2-dv6d-2A0A0G2JGQ7 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm16061-201ENSMUST00000122167 857 ntBASIC14.33□□□□□ -0.12
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm13474-201ENSMUST00000122466 815 ntBASIC14.33□□□□□ -0.12
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm2274-201ENSMUST00000184539 609 ntBASIC14.33□□□□□ -0.12
Trav15d-2-dv6d-2A0A0G2JGQ7 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms