Protein–RNA interactions for Protein: A0A0G2JG37

Trav9d-4, T cell receptor alpha variable 9D-4 (Fragment), mousemouse

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9d-4A0A0G2JG37 Gm29340-201ENSMUST00000188763 3854 ntBASIC11.26□□□□□ -0.61
Trav9d-4A0A0G2JG37 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav9d-4A0A0G2JG37 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC11.26□□□□□ -0.61
Trav9d-4A0A0G2JG37 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Trav9d-4A0A0G2JG37 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC11.26□□□□□ -0.61
Trav9d-4A0A0G2JG37 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav9d-4A0A0G2JG37 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Trav9d-4A0A0G2JG37 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC11.26□□□□□ -0.61
Trav9d-4A0A0G2JG37 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Trav9d-4A0A0G2JG37 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav9d-4A0A0G2JG37 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav9d-4A0A0G2JG37 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC11.25□□□□□ -0.61
Trav9d-4A0A0G2JG37 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Trav9d-4A0A0G2JG37 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Trav9d-4A0A0G2JG37 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Trav9d-4A0A0G2JG37 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav9d-4A0A0G2JG37 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Trav9d-4A0A0G2JG37 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC11.25□□□□□ -0.61
Trav9d-4A0A0G2JG37 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav9d-4A0A0G2JG37 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Trav9d-4A0A0G2JG37 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Trav9d-4A0A0G2JG37 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav9d-4A0A0G2JG37 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC11.25□□□□□ -0.61
Trav9d-4A0A0G2JG37 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav9d-4A0A0G2JG37 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav9d-4A0A0G2JG37 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav9d-4A0A0G2JG37 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav9d-4A0A0G2JG37 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav9d-4A0A0G2JG37 Gm10849-201ENSMUST00000100397 618 ntBASIC11.25□□□□□ -0.61
Trav9d-4A0A0G2JG37 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Trav9d-4A0A0G2JG37 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav9d-4A0A0G2JG37 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC11.25□□□□□ -0.61
Trav9d-4A0A0G2JG37 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav9d-4A0A0G2JG37 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC11.25□□□□□ -0.61
Trav9d-4A0A0G2JG37 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav9d-4A0A0G2JG37 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav9d-4A0A0G2JG37 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav9d-4A0A0G2JG37 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC11.25□□□□□ -0.61
Trav9d-4A0A0G2JG37 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Trav9d-4A0A0G2JG37 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Trav9d-4A0A0G2JG37 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav9d-4A0A0G2JG37 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Trav9d-4A0A0G2JG37 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav9d-4A0A0G2JG37 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Trav9d-4A0A0G2JG37 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav9d-4A0A0G2JG37 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Trav9d-4A0A0G2JG37 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC11.25□□□□□ -0.61
Trav9d-4A0A0G2JG37 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Trav9d-4A0A0G2JG37 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav9d-4A0A0G2JG37 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Trav9d-4A0A0G2JG37 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Trav9d-4A0A0G2JG37 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
Trav9d-4A0A0G2JG37 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav9d-4A0A0G2JG37 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav9d-4A0A0G2JG37 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC11.24□□□□□ -0.61
Trav9d-4A0A0G2JG37 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav9d-4A0A0G2JG37 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav9d-4A0A0G2JG37 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav9d-4A0A0G2JG37 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav9d-4A0A0G2JG37 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav9d-4A0A0G2JG37 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav9d-4A0A0G2JG37 Gm11927-201ENSMUST00000118472 759 ntBASIC11.24□□□□□ -0.61
Trav9d-4A0A0G2JG37 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC11.24□□□□□ -0.61
Trav9d-4A0A0G2JG37 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Trav9d-4A0A0G2JG37 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC11.24□□□□□ -0.61
Trav9d-4A0A0G2JG37 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Trav9d-4A0A0G2JG37 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav9d-4A0A0G2JG37 Gm6576-201ENSMUST00000169678 883 ntBASIC11.24□□□□□ -0.61
Trav9d-4A0A0G2JG37 Mir5133-201ENSMUST00000174955 77 ntBASIC11.24□□□□□ -0.61
Trav9d-4A0A0G2JG37 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC11.24□□□□□ -0.61
Trav9d-4A0A0G2JG37 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC11.24□□□□□ -0.61
Trav9d-4A0A0G2JG37 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav9d-4A0A0G2JG37 Mtag2-201ENSMUST00000058665 714 ntBASIC11.24□□□□□ -0.61
Trav9d-4A0A0G2JG37 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav9d-4A0A0G2JG37 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
Trav9d-4A0A0G2JG37 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Trav9d-4A0A0G2JG37 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav9d-4A0A0G2JG37 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav9d-4A0A0G2JG37 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC11.24□□□□□ -0.61
Trav9d-4A0A0G2JG37 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav9d-4A0A0G2JG37 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav9d-4A0A0G2JG37 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Trav9d-4A0A0G2JG37 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav9d-4A0A0G2JG37 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Trav9d-4A0A0G2JG37 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav9d-4A0A0G2JG37 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav9d-4A0A0G2JG37 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC11.24□□□□□ -0.61
Trav9d-4A0A0G2JG37 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Trav9d-4A0A0G2JG37 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav9d-4A0A0G2JG37 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Trav9d-4A0A0G2JG37 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Trav9d-4A0A0G2JG37 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav9d-4A0A0G2JG37 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav9d-4A0A0G2JG37 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav9d-4A0A0G2JG37 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Trav9d-4A0A0G2JG37 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav9d-4A0A0G2JG37 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav9d-4A0A0G2JG37 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav9d-4A0A0G2JG37 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC11.23□□□□□ -0.61
Trav9d-4A0A0G2JG37 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC11.23□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms