Protein–RNA interactions for Protein: A0A0G2JG01

Trav13n-4, T cell receptor alpha variable 13N-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-4A0A0G2JG01 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Trav13n-4A0A0G2JG01 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav13n-4A0A0G2JG01 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav13n-4A0A0G2JG01 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav13n-4A0A0G2JG01 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav13n-4A0A0G2JG01 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav13n-4A0A0G2JG01 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Trav13n-4A0A0G2JG01 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav13n-4A0A0G2JG01 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav13n-4A0A0G2JG01 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav13n-4A0A0G2JG01 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav13n-4A0A0G2JG01 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav13n-4A0A0G2JG01 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Trav13n-4A0A0G2JG01 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
Trav13n-4A0A0G2JG01 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trav13n-4A0A0G2JG01 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav13n-4A0A0G2JG01 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav13n-4A0A0G2JG01 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trav13n-4A0A0G2JG01 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav13n-4A0A0G2JG01 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav13n-4A0A0G2JG01 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav13n-4A0A0G2JG01 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav13n-4A0A0G2JG01 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Trav13n-4A0A0G2JG01 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trav13n-4A0A0G2JG01 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC13.31□□□□□ -0.28
Trav13n-4A0A0G2JG01 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Trav13n-4A0A0G2JG01 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC13.31□□□□□ -0.28
Trav13n-4A0A0G2JG01 Gm4217-201ENSMUST00000182243 1002 ntBASIC13.31□□□□□ -0.28
Trav13n-4A0A0G2JG01 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC13.31□□□□□ -0.28
Trav13n-4A0A0G2JG01 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Trav13n-4A0A0G2JG01 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav13n-4A0A0G2JG01 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav13n-4A0A0G2JG01 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav13n-4A0A0G2JG01 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC13.31□□□□□ -0.28
Trav13n-4A0A0G2JG01 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trav13n-4A0A0G2JG01 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Trav13n-4A0A0G2JG01 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav13n-4A0A0G2JG01 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trav13n-4A0A0G2JG01 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav13n-4A0A0G2JG01 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav13n-4A0A0G2JG01 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav13n-4A0A0G2JG01 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav13n-4A0A0G2JG01 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC13.31□□□□□ -0.28
Trav13n-4A0A0G2JG01 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Trav13n-4A0A0G2JG01 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav13n-4A0A0G2JG01 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav13n-4A0A0G2JG01 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Trav13n-4A0A0G2JG01 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav13n-4A0A0G2JG01 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav13n-4A0A0G2JG01 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav13n-4A0A0G2JG01 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav13n-4A0A0G2JG01 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav13n-4A0A0G2JG01 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav13n-4A0A0G2JG01 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav13n-4A0A0G2JG01 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC13.3□□□□□ -0.28
Trav13n-4A0A0G2JG01 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trav13n-4A0A0G2JG01 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trav13n-4A0A0G2JG01 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav13n-4A0A0G2JG01 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trav13n-4A0A0G2JG01 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC13.3□□□□□ -0.28
Trav13n-4A0A0G2JG01 Gm7638-201ENSMUST00000121348 967 ntBASIC13.3□□□□□ -0.28
Trav13n-4A0A0G2JG01 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav13n-4A0A0G2JG01 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trav13n-4A0A0G2JG01 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav13n-4A0A0G2JG01 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav13n-4A0A0G2JG01 Gm8839-201ENSMUST00000121279 1645 ntBASIC13.3□□□□□ -0.28
Trav13n-4A0A0G2JG01 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav13n-4A0A0G2JG01 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav13n-4A0A0G2JG01 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trav13n-4A0A0G2JG01 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav13n-4A0A0G2JG01 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Trav13n-4A0A0G2JG01 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav13n-4A0A0G2JG01 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav13n-4A0A0G2JG01 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav13n-4A0A0G2JG01 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav13n-4A0A0G2JG01 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trav13n-4A0A0G2JG01 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav13n-4A0A0G2JG01 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav13n-4A0A0G2JG01 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav13n-4A0A0G2JG01 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Trav13n-4A0A0G2JG01 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Trav13n-4A0A0G2JG01 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav13n-4A0A0G2JG01 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav13n-4A0A0G2JG01 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav13n-4A0A0G2JG01 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC13.29□□□□□ -0.28
Trav13n-4A0A0G2JG01 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Trav13n-4A0A0G2JG01 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav13n-4A0A0G2JG01 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav13n-4A0A0G2JG01 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Trav13n-4A0A0G2JG01 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav13n-4A0A0G2JG01 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trav13n-4A0A0G2JG01 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav13n-4A0A0G2JG01 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav13n-4A0A0G2JG01 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav13n-4A0A0G2JG01 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav13n-4A0A0G2JG01 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC13.29□□□□□ -0.28
Trav13n-4A0A0G2JG01 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trav13n-4A0A0G2JG01 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC13.29□□□□□ -0.28
Trav13n-4A0A0G2JG01 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trav13n-4A0A0G2JG01 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms