Protein–RNA interactions for Protein: A0A0G2JEV5

Trav7-1, T cell receptor alpha variable 7-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7-1A0A0G2JEV5 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Trav7-1A0A0G2JEV5 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav7-1A0A0G2JEV5 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav7-1A0A0G2JEV5 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trav7-1A0A0G2JEV5 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav7-1A0A0G2JEV5 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC12.63□□□□□ -0.39
Trav7-1A0A0G2JEV5 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Trav7-1A0A0G2JEV5 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav7-1A0A0G2JEV5 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Trav7-1A0A0G2JEV5 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC12.63□□□□□ -0.39
Trav7-1A0A0G2JEV5 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav7-1A0A0G2JEV5 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav7-1A0A0G2JEV5 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
Trav7-1A0A0G2JEV5 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav7-1A0A0G2JEV5 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav7-1A0A0G2JEV5 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav7-1A0A0G2JEV5 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav7-1A0A0G2JEV5 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav7-1A0A0G2JEV5 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav7-1A0A0G2JEV5 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav7-1A0A0G2JEV5 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC12.62□□□□□ -0.39
Trav7-1A0A0G2JEV5 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav7-1A0A0G2JEV5 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trav7-1A0A0G2JEV5 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav7-1A0A0G2JEV5 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Trav7-1A0A0G2JEV5 Gfra2-202ENSMUST00000227633 1480 ntBASIC12.62□□□□□ -0.39
Trav7-1A0A0G2JEV5 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav7-1A0A0G2JEV5 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav7-1A0A0G2JEV5 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC12.62□□□□□ -0.39
Trav7-1A0A0G2JEV5 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trav7-1A0A0G2JEV5 Gm7791-201ENSMUST00000219066 539 ntBASIC12.62□□□□□ -0.39
Trav7-1A0A0G2JEV5 AC175538.1-201ENSMUST00000225343 1269 ntBASIC12.62□□□□□ -0.39
Trav7-1A0A0G2JEV5 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav7-1A0A0G2JEV5 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Trav7-1A0A0G2JEV5 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav7-1A0A0G2JEV5 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav7-1A0A0G2JEV5 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
Trav7-1A0A0G2JEV5 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
Trav7-1A0A0G2JEV5 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav7-1A0A0G2JEV5 Gm19430-201ENSMUST00000193847 2137 ntBASIC12.62□□□□□ -0.39
Trav7-1A0A0G2JEV5 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
Trav7-1A0A0G2JEV5 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Trav7-1A0A0G2JEV5 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav7-1A0A0G2JEV5 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav7-1A0A0G2JEV5 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC12.62□□□□□ -0.39
Trav7-1A0A0G2JEV5 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav7-1A0A0G2JEV5 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav7-1A0A0G2JEV5 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav7-1A0A0G2JEV5 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC12.62□□□□□ -0.39
Trav7-1A0A0G2JEV5 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trav7-1A0A0G2JEV5 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trav7-1A0A0G2JEV5 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trav7-1A0A0G2JEV5 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC12.61□□□□□ -0.39
Trav7-1A0A0G2JEV5 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav7-1A0A0G2JEV5 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav7-1A0A0G2JEV5 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav7-1A0A0G2JEV5 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav7-1A0A0G2JEV5 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav7-1A0A0G2JEV5 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trav7-1A0A0G2JEV5 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav7-1A0A0G2JEV5 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Trav7-1A0A0G2JEV5 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav7-1A0A0G2JEV5 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav7-1A0A0G2JEV5 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav7-1A0A0G2JEV5 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav7-1A0A0G2JEV5 AC133083.1-201ENSMUST00000221736 2209 ntBASIC12.61□□□□□ -0.39
Trav7-1A0A0G2JEV5 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav7-1A0A0G2JEV5 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav7-1A0A0G2JEV5 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav7-1A0A0G2JEV5 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trav7-1A0A0G2JEV5 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav7-1A0A0G2JEV5 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Trav7-1A0A0G2JEV5 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav7-1A0A0G2JEV5 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav7-1A0A0G2JEV5 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trav7-1A0A0G2JEV5 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trav7-1A0A0G2JEV5 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav7-1A0A0G2JEV5 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC12.6□□□□□ -0.39
Trav7-1A0A0G2JEV5 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC12.6□□□□□ -0.39
Trav7-1A0A0G2JEV5 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trav7-1A0A0G2JEV5 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav7-1A0A0G2JEV5 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav7-1A0A0G2JEV5 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav7-1A0A0G2JEV5 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav7-1A0A0G2JEV5 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trav7-1A0A0G2JEV5 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC12.6□□□□□ -0.39
Trav7-1A0A0G2JEV5 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav7-1A0A0G2JEV5 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Trav7-1A0A0G2JEV5 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav7-1A0A0G2JEV5 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav7-1A0A0G2JEV5 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav7-1A0A0G2JEV5 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC12.6□□□□□ -0.39
Trav7-1A0A0G2JEV5 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav7-1A0A0G2JEV5 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav7-1A0A0G2JEV5 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC12.6□□□□□ -0.39
Trav7-1A0A0G2JEV5 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav7-1A0A0G2JEV5 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav7-1A0A0G2JEV5 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC12.59□□□□□ -0.39
Trav7-1A0A0G2JEV5 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav7-1A0A0G2JEV5 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms