Protein–RNA interactions for Protein: A0A0B4J1P1

Trbv30, T cell receptor beta, variable 30 (Fragment), mousemouse

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv30A0A0B4J1P1 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trbv30A0A0B4J1P1 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trbv30A0A0B4J1P1 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Trbv30A0A0B4J1P1 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trbv30A0A0B4J1P1 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trbv30A0A0B4J1P1 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC12.37□□□□□ -0.43
Trbv30A0A0B4J1P1 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC12.37□□□□□ -0.43
Trbv30A0A0B4J1P1 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trbv30A0A0B4J1P1 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trbv30A0A0B4J1P1 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Trbv30A0A0B4J1P1 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
Trbv30A0A0B4J1P1 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trbv30A0A0B4J1P1 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trbv30A0A0B4J1P1 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trbv30A0A0B4J1P1 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trbv30A0A0B4J1P1 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trbv30A0A0B4J1P1 Zfp264-201ENSMUST00000208656 1563 ntBASIC12.36□□□□□ -0.43
Trbv30A0A0B4J1P1 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trbv30A0A0B4J1P1 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trbv30A0A0B4J1P1 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC12.36□□□□□ -0.43
Trbv30A0A0B4J1P1 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC12.36□□□□□ -0.43
Trbv30A0A0B4J1P1 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trbv30A0A0B4J1P1 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
Trbv30A0A0B4J1P1 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trbv30A0A0B4J1P1 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC12.36□□□□□ -0.43
Trbv30A0A0B4J1P1 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC12.36□□□□□ -0.43
Trbv30A0A0B4J1P1 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trbv30A0A0B4J1P1 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC12.36□□□□□ -0.43
Trbv30A0A0B4J1P1 Gm29707-201ENSMUST00000196325 491 ntBASIC12.36□□□□□ -0.43
Trbv30A0A0B4J1P1 Gm18421-201ENSMUST00000204122 625 ntBASIC12.36□□□□□ -0.43
Trbv30A0A0B4J1P1 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trbv30A0A0B4J1P1 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC12.36□□□□□ -0.43
Trbv30A0A0B4J1P1 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trbv30A0A0B4J1P1 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Trbv30A0A0B4J1P1 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trbv30A0A0B4J1P1 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Trbv30A0A0B4J1P1 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trbv30A0A0B4J1P1 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Trbv30A0A0B4J1P1 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trbv30A0A0B4J1P1 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trbv30A0A0B4J1P1 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trbv30A0A0B4J1P1 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trbv30A0A0B4J1P1 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trbv30A0A0B4J1P1 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Trbv30A0A0B4J1P1 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trbv30A0A0B4J1P1 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Trbv30A0A0B4J1P1 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC12.35□□□□□ -0.43
Trbv30A0A0B4J1P1 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trbv30A0A0B4J1P1 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Trbv30A0A0B4J1P1 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
Trbv30A0A0B4J1P1 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
Trbv30A0A0B4J1P1 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
Trbv30A0A0B4J1P1 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trbv30A0A0B4J1P1 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trbv30A0A0B4J1P1 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trbv30A0A0B4J1P1 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC12.35□□□□□ -0.43
Trbv30A0A0B4J1P1 Gm6659-201ENSMUST00000174752 547 ntBASIC12.35□□□□□ -0.43
Trbv30A0A0B4J1P1 Gm23634-201ENSMUST00000175071 91 ntBASIC12.35□□□□□ -0.43
Trbv30A0A0B4J1P1 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC12.35□□□□□ -0.43
Trbv30A0A0B4J1P1 Gm44450-201ENSMUST00000199528 114 ntBASIC12.35□□□□□ -0.43
Trbv30A0A0B4J1P1 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC12.35□□□□□ -0.43
Trbv30A0A0B4J1P1 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trbv30A0A0B4J1P1 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trbv30A0A0B4J1P1 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Trbv30A0A0B4J1P1 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trbv30A0A0B4J1P1 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Trbv30A0A0B4J1P1 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trbv30A0A0B4J1P1 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trbv30A0A0B4J1P1 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trbv30A0A0B4J1P1 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trbv30A0A0B4J1P1 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trbv30A0A0B4J1P1 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trbv30A0A0B4J1P1 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trbv30A0A0B4J1P1 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trbv30A0A0B4J1P1 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC12.35□□□□□ -0.43
Trbv30A0A0B4J1P1 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trbv30A0A0B4J1P1 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trbv30A0A0B4J1P1 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trbv30A0A0B4J1P1 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC12.34□□□□□ -0.43
Trbv30A0A0B4J1P1 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Trbv30A0A0B4J1P1 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Trbv30A0A0B4J1P1 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trbv30A0A0B4J1P1 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trbv30A0A0B4J1P1 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trbv30A0A0B4J1P1 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trbv30A0A0B4J1P1 AA414768-201ENSMUST00000121924 1257 ntBASIC12.34□□□□□ -0.43
Trbv30A0A0B4J1P1 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC12.34□□□□□ -0.43
Trbv30A0A0B4J1P1 Gm5587-201ENSMUST00000206270 674 ntBASIC12.34□□□□□ -0.43
Trbv30A0A0B4J1P1 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC12.34□□□□□ -0.43
Trbv30A0A0B4J1P1 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trbv30A0A0B4J1P1 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trbv30A0A0B4J1P1 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trbv30A0A0B4J1P1 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trbv30A0A0B4J1P1 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Trbv30A0A0B4J1P1 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trbv30A0A0B4J1P1 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trbv30A0A0B4J1P1 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trbv30A0A0B4J1P1 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trbv30A0A0B4J1P1 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trbv30A0A0B4J1P1 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms