Protein–RNA interactions for Protein: A0A0B4J1K2

Trav9-4, T cell receptor alpha variable 9-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9-4A0A0B4J1K2 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav9-4A0A0B4J1K2 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trav9-4A0A0B4J1K2 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav9-4A0A0B4J1K2 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trav9-4A0A0B4J1K2 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Trav9-4A0A0B4J1K2 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav9-4A0A0B4J1K2 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trav9-4A0A0B4J1K2 AA414768-201ENSMUST00000121924 1257 ntBASIC12.3□□□□□ -0.44
Trav9-4A0A0B4J1K2 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav9-4A0A0B4J1K2 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC12.3□□□□□ -0.44
Trav9-4A0A0B4J1K2 Gm6728-201ENSMUST00000178117 1065 ntBASIC12.3□□□□□ -0.44
Trav9-4A0A0B4J1K2 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav9-4A0A0B4J1K2 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav9-4A0A0B4J1K2 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav9-4A0A0B4J1K2 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav9-4A0A0B4J1K2 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav9-4A0A0B4J1K2 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Trav9-4A0A0B4J1K2 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trav9-4A0A0B4J1K2 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav9-4A0A0B4J1K2 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav9-4A0A0B4J1K2 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC12.3□□□□□ -0.44
Trav9-4A0A0B4J1K2 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav9-4A0A0B4J1K2 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav9-4A0A0B4J1K2 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trav9-4A0A0B4J1K2 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav9-4A0A0B4J1K2 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trav9-4A0A0B4J1K2 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav9-4A0A0B4J1K2 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav9-4A0A0B4J1K2 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trav9-4A0A0B4J1K2 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav9-4A0A0B4J1K2 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav9-4A0A0B4J1K2 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC12.29□□□□□ -0.44
Trav9-4A0A0B4J1K2 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Trav9-4A0A0B4J1K2 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav9-4A0A0B4J1K2 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav9-4A0A0B4J1K2 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Trav9-4A0A0B4J1K2 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trav9-4A0A0B4J1K2 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav9-4A0A0B4J1K2 Mir770-201ENSMUST00000103252 94 ntBASIC12.29□□□□□ -0.44
Trav9-4A0A0B4J1K2 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
Trav9-4A0A0B4J1K2 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav9-4A0A0B4J1K2 Gm11860-201ENSMUST00000122346 1010 ntBASIC12.29□□□□□ -0.44
Trav9-4A0A0B4J1K2 Gm9013-201ENSMUST00000132939 882 ntBASIC12.29□□□□□ -0.44
Trav9-4A0A0B4J1K2 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav9-4A0A0B4J1K2 Gm29707-201ENSMUST00000196325 491 ntBASIC12.29□□□□□ -0.44
Trav9-4A0A0B4J1K2 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav9-4A0A0B4J1K2 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav9-4A0A0B4J1K2 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC12.29□□□□□ -0.44
Trav9-4A0A0B4J1K2 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav9-4A0A0B4J1K2 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav9-4A0A0B4J1K2 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trav9-4A0A0B4J1K2 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav9-4A0A0B4J1K2 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav9-4A0A0B4J1K2 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav9-4A0A0B4J1K2 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC12.29□□□□□ -0.44
Trav9-4A0A0B4J1K2 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav9-4A0A0B4J1K2 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav9-4A0A0B4J1K2 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav9-4A0A0B4J1K2 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
Trav9-4A0A0B4J1K2 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav9-4A0A0B4J1K2 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav9-4A0A0B4J1K2 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav9-4A0A0B4J1K2 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Trav9-4A0A0B4J1K2 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav9-4A0A0B4J1K2 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav9-4A0A0B4J1K2 Gm8258-201ENSMUST00000055593 1449 ntBASIC12.28□□□□□ -0.44
Trav9-4A0A0B4J1K2 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav9-4A0A0B4J1K2 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav9-4A0A0B4J1K2 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav9-4A0A0B4J1K2 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Trav9-4A0A0B4J1K2 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav9-4A0A0B4J1K2 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trav9-4A0A0B4J1K2 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav9-4A0A0B4J1K2 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trav9-4A0A0B4J1K2 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav9-4A0A0B4J1K2 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav9-4A0A0B4J1K2 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav9-4A0A0B4J1K2 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trav9-4A0A0B4J1K2 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trav9-4A0A0B4J1K2 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
Trav9-4A0A0B4J1K2 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC12.28□□□□□ -0.44
Trav9-4A0A0B4J1K2 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC12.28□□□□□ -0.44
Trav9-4A0A0B4J1K2 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC12.28□□□□□ -0.44
Trav9-4A0A0B4J1K2 Gm6623-201ENSMUST00000173570 544 ntBASIC12.28□□□□□ -0.44
Trav9-4A0A0B4J1K2 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav9-4A0A0B4J1K2 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trav9-4A0A0B4J1K2 Gm5587-201ENSMUST00000206270 674 ntBASIC12.28□□□□□ -0.44
Trav9-4A0A0B4J1K2 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC12.28□□□□□ -0.44
Trav9-4A0A0B4J1K2 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav9-4A0A0B4J1K2 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav9-4A0A0B4J1K2 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav9-4A0A0B4J1K2 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC12.28□□□□□ -0.44
Trav9-4A0A0B4J1K2 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav9-4A0A0B4J1K2 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC12.28□□□□□ -0.44
Trav9-4A0A0B4J1K2 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav9-4A0A0B4J1K2 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trav9-4A0A0B4J1K2 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC12.28□□□□□ -0.44
Trav9-4A0A0B4J1K2 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav9-4A0A0B4J1K2 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav9-4A0A0B4J1K2 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 50.9 ms