Protein–RNA interactions for Protein: A0A0B4J1J2

Igkv5-43, Immunoglobulin kappa chain variable 5-43 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv5-43A0A0B4J1J2 Gm44466-201ENSMUST00000200264 138 ntBASIC16.65■□□□□ 0.26
Igkv5-43A0A0B4J1J2 Gm44359-201ENSMUST00000200671 138 ntBASIC16.65■□□□□ 0.26
Igkv5-43A0A0B4J1J2 Gm7506-201ENSMUST00000207758 815 ntBASIC16.65■□□□□ 0.26
Igkv5-43A0A0B4J1J2 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Igkv5-43A0A0B4J1J2 Gm7461-201ENSMUST00000058918 827 ntBASIC16.65■□□□□ 0.26
Igkv5-43A0A0B4J1J2 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Igkv5-43A0A0B4J1J2 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Igkv5-43A0A0B4J1J2 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Igkv5-43A0A0B4J1J2 AC115863.1-201ENSMUST00000214815 1813 ntBASIC16.65■□□□□ 0.26
Igkv5-43A0A0B4J1J2 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Igkv5-43A0A0B4J1J2 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Igkv5-43A0A0B4J1J2 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Igkv5-43A0A0B4J1J2 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Igkv5-43A0A0B4J1J2 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC16.65■□□□□ 0.26
Igkv5-43A0A0B4J1J2 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Igkv5-43A0A0B4J1J2 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Igkv5-43A0A0B4J1J2 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Igkv5-43A0A0B4J1J2 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Igkv5-43A0A0B4J1J2 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC16.64■□□□□ 0.25
Igkv5-43A0A0B4J1J2 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC16.64■□□□□ 0.25
Igkv5-43A0A0B4J1J2 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Igkv5-43A0A0B4J1J2 AC164629.2-201ENSMUST00000217916 270 ntBASIC16.64■□□□□ 0.25
Igkv5-43A0A0B4J1J2 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Igkv5-43A0A0B4J1J2 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Igkv5-43A0A0B4J1J2 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Igkv5-43A0A0B4J1J2 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Igkv5-43A0A0B4J1J2 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Igkv5-43A0A0B4J1J2 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC16.63■□□□□ 0.25
Igkv5-43A0A0B4J1J2 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
Igkv5-43A0A0B4J1J2 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC16.63■□□□□ 0.25
Igkv5-43A0A0B4J1J2 Gm13884-201ENSMUST00000118103 829 ntBASIC16.63■□□□□ 0.25
Igkv5-43A0A0B4J1J2 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
Igkv5-43A0A0B4J1J2 Gm5864-201ENSMUST00000202263 970 ntBASIC16.63■□□□□ 0.25
Igkv5-43A0A0B4J1J2 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Igkv5-43A0A0B4J1J2 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Igkv5-43A0A0B4J1J2 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC16.63■□□□□ 0.25
Igkv5-43A0A0B4J1J2 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Igkv5-43A0A0B4J1J2 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Igkv5-43A0A0B4J1J2 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Igkv5-43A0A0B4J1J2 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Igkv5-43A0A0B4J1J2 Haglr-201ENSMUST00000100000 2085 ntBASIC16.63■□□□□ 0.25
Igkv5-43A0A0B4J1J2 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Igkv5-43A0A0B4J1J2 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC16.63■□□□□ 0.25
Igkv5-43A0A0B4J1J2 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Igkv5-43A0A0B4J1J2 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Igkv5-43A0A0B4J1J2 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
Igkv5-43A0A0B4J1J2 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC16.62■□□□□ 0.25
Igkv5-43A0A0B4J1J2 Gm7292-201ENSMUST00000194706 2527 ntBASIC16.62■□□□□ 0.25
Igkv5-43A0A0B4J1J2 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC16.62■□□□□ 0.25
Igkv5-43A0A0B4J1J2 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Igkv5-43A0A0B4J1J2 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Igkv5-43A0A0B4J1J2 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Igkv5-43A0A0B4J1J2 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Igkv5-43A0A0B4J1J2 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC16.62■□□□□ 0.25
Igkv5-43A0A0B4J1J2 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC16.62■□□□□ 0.25
Igkv5-43A0A0B4J1J2 Mir8098-201ENSMUST00000184011 137 ntBASIC16.62■□□□□ 0.25
Igkv5-43A0A0B4J1J2 Gm28659-201ENSMUST00000188013 759 ntBASIC16.62■□□□□ 0.25
Igkv5-43A0A0B4J1J2 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC16.62■□□□□ 0.25
Igkv5-43A0A0B4J1J2 Gm6296-201ENSMUST00000222599 943 ntBASIC16.62■□□□□ 0.25
Igkv5-43A0A0B4J1J2 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Igkv5-43A0A0B4J1J2 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Igkv5-43A0A0B4J1J2 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC16.62■□□□□ 0.25
Igkv5-43A0A0B4J1J2 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Igkv5-43A0A0B4J1J2 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Igkv5-43A0A0B4J1J2 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Igkv5-43A0A0B4J1J2 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Igkv5-43A0A0B4J1J2 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Igkv5-43A0A0B4J1J2 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Igkv5-43A0A0B4J1J2 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Igkv5-43A0A0B4J1J2 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Igkv5-43A0A0B4J1J2 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Igkv5-43A0A0B4J1J2 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Igkv5-43A0A0B4J1J2 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Igkv5-43A0A0B4J1J2 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Igkv5-43A0A0B4J1J2 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Igkv5-43A0A0B4J1J2 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Igkv5-43A0A0B4J1J2 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Igkv5-43A0A0B4J1J2 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Igkv5-43A0A0B4J1J2 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Igkv5-43A0A0B4J1J2 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC16.61■□□□□ 0.25
Igkv5-43A0A0B4J1J2 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Igkv5-43A0A0B4J1J2 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Igkv5-43A0A0B4J1J2 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Igkv5-43A0A0B4J1J2 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Igkv5-43A0A0B4J1J2 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Igkv5-43A0A0B4J1J2 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Igkv5-43A0A0B4J1J2 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Igkv5-43A0A0B4J1J2 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC16.61■□□□□ 0.25
Igkv5-43A0A0B4J1J2 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC16.61■□□□□ 0.25
Igkv5-43A0A0B4J1J2 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Igkv5-43A0A0B4J1J2 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC16.61■□□□□ 0.25
Igkv5-43A0A0B4J1J2 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC16.61■□□□□ 0.25
Igkv5-43A0A0B4J1J2 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Igkv5-43A0A0B4J1J2 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Igkv5-43A0A0B4J1J2 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Igkv5-43A0A0B4J1J2 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Igkv5-43A0A0B4J1J2 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC16.6■□□□□ 0.25
Igkv5-43A0A0B4J1J2 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Igkv5-43A0A0B4J1J2 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Igkv5-43A0A0B4J1J2 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms