Protein–RNA interactions for Protein: A0A0B4J1H3

Trbv16, T cell receptor beta, variable 16 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv16A0A0B4J1H3 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trbv16A0A0B4J1H3 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trbv16A0A0B4J1H3 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trbv16A0A0B4J1H3 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trbv16A0A0B4J1H3 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trbv16A0A0B4J1H3 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Trbv16A0A0B4J1H3 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC11.87□□□□□ -0.51
Trbv16A0A0B4J1H3 Gm16042-201ENSMUST00000204813 1247 ntBASIC11.87□□□□□ -0.51
Trbv16A0A0B4J1H3 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trbv16A0A0B4J1H3 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC11.87□□□□□ -0.51
Trbv16A0A0B4J1H3 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC11.87□□□□□ -0.51
Trbv16A0A0B4J1H3 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trbv16A0A0B4J1H3 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trbv16A0A0B4J1H3 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trbv16A0A0B4J1H3 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC11.87□□□□□ -0.51
Trbv16A0A0B4J1H3 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trbv16A0A0B4J1H3 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trbv16A0A0B4J1H3 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trbv16A0A0B4J1H3 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trbv16A0A0B4J1H3 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trbv16A0A0B4J1H3 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC11.87□□□□□ -0.51
Trbv16A0A0B4J1H3 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trbv16A0A0B4J1H3 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trbv16A0A0B4J1H3 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trbv16A0A0B4J1H3 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trbv16A0A0B4J1H3 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Trbv16A0A0B4J1H3 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trbv16A0A0B4J1H3 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trbv16A0A0B4J1H3 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trbv16A0A0B4J1H3 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trbv16A0A0B4J1H3 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trbv16A0A0B4J1H3 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trbv16A0A0B4J1H3 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trbv16A0A0B4J1H3 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trbv16A0A0B4J1H3 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trbv16A0A0B4J1H3 Gm13186-201ENSMUST00000118031 316 ntBASIC11.86□□□□□ -0.51
Trbv16A0A0B4J1H3 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC11.86□□□□□ -0.51
Trbv16A0A0B4J1H3 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC11.86□□□□□ -0.51
Trbv16A0A0B4J1H3 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC11.86□□□□□ -0.51
Trbv16A0A0B4J1H3 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC11.86□□□□□ -0.51
Trbv16A0A0B4J1H3 Odf3b-204ENSMUST00000227834 930 ntBASIC11.86□□□□□ -0.51
Trbv16A0A0B4J1H3 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Trbv16A0A0B4J1H3 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trbv16A0A0B4J1H3 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trbv16A0A0B4J1H3 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trbv16A0A0B4J1H3 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trbv16A0A0B4J1H3 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trbv16A0A0B4J1H3 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Trbv16A0A0B4J1H3 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC11.86□□□□□ -0.51
Trbv16A0A0B4J1H3 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trbv16A0A0B4J1H3 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trbv16A0A0B4J1H3 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trbv16A0A0B4J1H3 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trbv16A0A0B4J1H3 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trbv16A0A0B4J1H3 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trbv16A0A0B4J1H3 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trbv16A0A0B4J1H3 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trbv16A0A0B4J1H3 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC11.85□□□□□ -0.51
Trbv16A0A0B4J1H3 Mir1199-201ENSMUST00000117015 119 ntBASIC11.85□□□□□ -0.51
Trbv16A0A0B4J1H3 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC11.85□□□□□ -0.51
Trbv16A0A0B4J1H3 Gm18115-201ENSMUST00000221209 621 ntBASIC11.85□□□□□ -0.51
Trbv16A0A0B4J1H3 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC11.85□□□□□ -0.51
Trbv16A0A0B4J1H3 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trbv16A0A0B4J1H3 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC11.85□□□□□ -0.51
Trbv16A0A0B4J1H3 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trbv16A0A0B4J1H3 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trbv16A0A0B4J1H3 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trbv16A0A0B4J1H3 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trbv16A0A0B4J1H3 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trbv16A0A0B4J1H3 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC11.85□□□□□ -0.51
Trbv16A0A0B4J1H3 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trbv16A0A0B4J1H3 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trbv16A0A0B4J1H3 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC11.85□□□□□ -0.51
Trbv16A0A0B4J1H3 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trbv16A0A0B4J1H3 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trbv16A0A0B4J1H3 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC11.85□□□□□ -0.51
Trbv16A0A0B4J1H3 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trbv16A0A0B4J1H3 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trbv16A0A0B4J1H3 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trbv16A0A0B4J1H3 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trbv16A0A0B4J1H3 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trbv16A0A0B4J1H3 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trbv16A0A0B4J1H3 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trbv16A0A0B4J1H3 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trbv16A0A0B4J1H3 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC11.84□□□□□ -0.51
Trbv16A0A0B4J1H3 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trbv16A0A0B4J1H3 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trbv16A0A0B4J1H3 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trbv16A0A0B4J1H3 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trbv16A0A0B4J1H3 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trbv16A0A0B4J1H3 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trbv16A0A0B4J1H3 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC11.84□□□□□ -0.51
Trbv16A0A0B4J1H3 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trbv16A0A0B4J1H3 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Trbv16A0A0B4J1H3 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trbv16A0A0B4J1H3 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trbv16A0A0B4J1H3 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Trbv16A0A0B4J1H3 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trbv16A0A0B4J1H3 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trbv16A0A0B4J1H3 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms