Protein–RNA interactions for Protein: A0A0A6YYE2

Trbv3, T cell receptor beta, variable 3 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv3A0A0A6YYE2 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Trbv3A0A0A6YYE2 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
Trbv3A0A0A6YYE2 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC12.68□□□□□ -0.38
Trbv3A0A0A6YYE2 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trbv3A0A0A6YYE2 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trbv3A0A0A6YYE2 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trbv3A0A0A6YYE2 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trbv3A0A0A6YYE2 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trbv3A0A0A6YYE2 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trbv3A0A0A6YYE2 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trbv3A0A0A6YYE2 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC12.68□□□□□ -0.38
Trbv3A0A0A6YYE2 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trbv3A0A0A6YYE2 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trbv3A0A0A6YYE2 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trbv3A0A0A6YYE2 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trbv3A0A0A6YYE2 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trbv3A0A0A6YYE2 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trbv3A0A0A6YYE2 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC12.68□□□□□ -0.38
Trbv3A0A0A6YYE2 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trbv3A0A0A6YYE2 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trbv3A0A0A6YYE2 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trbv3A0A0A6YYE2 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Trbv3A0A0A6YYE2 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trbv3A0A0A6YYE2 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trbv3A0A0A6YYE2 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trbv3A0A0A6YYE2 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trbv3A0A0A6YYE2 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Trbv3A0A0A6YYE2 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trbv3A0A0A6YYE2 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trbv3A0A0A6YYE2 Gm24841-201ENSMUST00000158676 357 ntBASIC12.67□□□□□ -0.38
Trbv3A0A0A6YYE2 Gm27000-201ENSMUST00000182943 842 ntBASIC12.67□□□□□ -0.38
Trbv3A0A0A6YYE2 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trbv3A0A0A6YYE2 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trbv3A0A0A6YYE2 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trbv3A0A0A6YYE2 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trbv3A0A0A6YYE2 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trbv3A0A0A6YYE2 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trbv3A0A0A6YYE2 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trbv3A0A0A6YYE2 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC12.67□□□□□ -0.38
Trbv3A0A0A6YYE2 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trbv3A0A0A6YYE2 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trbv3A0A0A6YYE2 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trbv3A0A0A6YYE2 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC12.67□□□□□ -0.38
Trbv3A0A0A6YYE2 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trbv3A0A0A6YYE2 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trbv3A0A0A6YYE2 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Trbv3A0A0A6YYE2 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trbv3A0A0A6YYE2 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trbv3A0A0A6YYE2 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Trbv3A0A0A6YYE2 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trbv3A0A0A6YYE2 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trbv3A0A0A6YYE2 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC12.66□□□□□ -0.38
Trbv3A0A0A6YYE2 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC12.66□□□□□ -0.38
Trbv3A0A0A6YYE2 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trbv3A0A0A6YYE2 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trbv3A0A0A6YYE2 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trbv3A0A0A6YYE2 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC12.66□□□□□ -0.38
Trbv3A0A0A6YYE2 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trbv3A0A0A6YYE2 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC12.66□□□□□ -0.38
Trbv3A0A0A6YYE2 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC12.66□□□□□ -0.38
Trbv3A0A0A6YYE2 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trbv3A0A0A6YYE2 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trbv3A0A0A6YYE2 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC12.66□□□□□ -0.38
Trbv3A0A0A6YYE2 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trbv3A0A0A6YYE2 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trbv3A0A0A6YYE2 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trbv3A0A0A6YYE2 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trbv3A0A0A6YYE2 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trbv3A0A0A6YYE2 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC12.66□□□□□ -0.38
Trbv3A0A0A6YYE2 AC154412.1-201ENSMUST00000226540 2786 ntBASIC12.66□□□□□ -0.38
Trbv3A0A0A6YYE2 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trbv3A0A0A6YYE2 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trbv3A0A0A6YYE2 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trbv3A0A0A6YYE2 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trbv3A0A0A6YYE2 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trbv3A0A0A6YYE2 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trbv3A0A0A6YYE2 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trbv3A0A0A6YYE2 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trbv3A0A0A6YYE2 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trbv3A0A0A6YYE2 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC12.65□□□□□ -0.38
Trbv3A0A0A6YYE2 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trbv3A0A0A6YYE2 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trbv3A0A0A6YYE2 Gm45203-201ENSMUST00000206384 1831 ntBASIC12.65□□□□□ -0.38
Trbv3A0A0A6YYE2 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trbv3A0A0A6YYE2 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC12.65□□□□□ -0.38
Trbv3A0A0A6YYE2 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC12.65□□□□□ -0.38
Trbv3A0A0A6YYE2 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trbv3A0A0A6YYE2 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trbv3A0A0A6YYE2 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC12.65□□□□□ -0.38
Trbv3A0A0A6YYE2 Gm26524-201ENSMUST00000192339 390 ntBASIC12.65□□□□□ -0.38
Trbv3A0A0A6YYE2 Gm37025-201ENSMUST00000195159 829 ntBASIC12.65□□□□□ -0.38
Trbv3A0A0A6YYE2 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC12.65□□□□□ -0.38
Trbv3A0A0A6YYE2 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Trbv3A0A0A6YYE2 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trbv3A0A0A6YYE2 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trbv3A0A0A6YYE2 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trbv3A0A0A6YYE2 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trbv3A0A0A6YYE2 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trbv3A0A0A6YYE2 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC12.65□□□□□ -0.38
Trbv3A0A0A6YYE2 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms