Protein–RNA interactions for Protein: A0A0A6YWV4

Trbc1, T cell receptor beta, constant region 1 (Fragment), mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbc1A0A0A6YWV4 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Trbc1A0A0A6YWV4 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trbc1A0A0A6YWV4 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trbc1A0A0A6YWV4 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Trbc1A0A0A6YWV4 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC15.06■□□□□ 0
Trbc1A0A0A6YWV4 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Trbc1A0A0A6YWV4 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC15.06■□□□□ 0
Trbc1A0A0A6YWV4 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC15.06■□□□□ 0
Trbc1A0A0A6YWV4 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trbc1A0A0A6YWV4 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trbc1A0A0A6YWV4 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trbc1A0A0A6YWV4 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trbc1A0A0A6YWV4 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trbc1A0A0A6YWV4 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC15.06■□□□□ 0
Trbc1A0A0A6YWV4 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trbc1A0A0A6YWV4 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Trbc1A0A0A6YWV4 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Trbc1A0A0A6YWV4 Gm11336-201ENSMUST00000118168 334 ntBASIC15.06■□□□□ 0
Trbc1A0A0A6YWV4 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC15.06■□□□□ 0
Trbc1A0A0A6YWV4 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC15.06■□□□□ 0
Trbc1A0A0A6YWV4 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trbc1A0A0A6YWV4 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trbc1A0A0A6YWV4 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC15.06■□□□□ 0
Trbc1A0A0A6YWV4 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trbc1A0A0A6YWV4 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC15.06■□□□□ 0
Trbc1A0A0A6YWV4 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trbc1A0A0A6YWV4 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trbc1A0A0A6YWV4 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
Trbc1A0A0A6YWV4 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trbc1A0A0A6YWV4 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Trbc1A0A0A6YWV4 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Trbc1A0A0A6YWV4 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC15.06■□□□□ 0
Trbc1A0A0A6YWV4 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Trbc1A0A0A6YWV4 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Trbc1A0A0A6YWV4 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC15.06■□□□□ 0
Trbc1A0A0A6YWV4 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trbc1A0A0A6YWV4 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trbc1A0A0A6YWV4 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Trbc1A0A0A6YWV4 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trbc1A0A0A6YWV4 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ 0
Trbc1A0A0A6YWV4 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Trbc1A0A0A6YWV4 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Trbc1A0A0A6YWV4 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
Trbc1A0A0A6YWV4 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC15.05■□□□□ -0
Trbc1A0A0A6YWV4 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trbc1A0A0A6YWV4 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trbc1A0A0A6YWV4 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trbc1A0A0A6YWV4 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trbc1A0A0A6YWV4 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trbc1A0A0A6YWV4 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
Trbc1A0A0A6YWV4 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC15.05■□□□□ -0
Trbc1A0A0A6YWV4 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC15.04■□□□□ -0
Trbc1A0A0A6YWV4 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Trbc1A0A0A6YWV4 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Trbc1A0A0A6YWV4 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trbc1A0A0A6YWV4 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC15.04■□□□□ -0
Trbc1A0A0A6YWV4 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trbc1A0A0A6YWV4 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC15.04■□□□□ -0
Trbc1A0A0A6YWV4 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC15.04■□□□□ -0
Trbc1A0A0A6YWV4 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Trbc1A0A0A6YWV4 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Trbc1A0A0A6YWV4 Gm11860-201ENSMUST00000122346 1010 ntBASIC15.04■□□□□ -0
Trbc1A0A0A6YWV4 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC15.04■□□□□ -0
Trbc1A0A0A6YWV4 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC15.04■□□□□ -0
Trbc1A0A0A6YWV4 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC15.04■□□□□ -0
Trbc1A0A0A6YWV4 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC15.04■□□□□ -0
Trbc1A0A0A6YWV4 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC15.04■□□□□ -0
Trbc1A0A0A6YWV4 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trbc1A0A0A6YWV4 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trbc1A0A0A6YWV4 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC15.04■□□□□ -0
Trbc1A0A0A6YWV4 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trbc1A0A0A6YWV4 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trbc1A0A0A6YWV4 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC15.04■□□□□ -0
Trbc1A0A0A6YWV4 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trbc1A0A0A6YWV4 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trbc1A0A0A6YWV4 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC15.04■□□□□ -0
Trbc1A0A0A6YWV4 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trbc1A0A0A6YWV4 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trbc1A0A0A6YWV4 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC15.04■□□□□ -0
Trbc1A0A0A6YWV4 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trbc1A0A0A6YWV4 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trbc1A0A0A6YWV4 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Trbc1A0A0A6YWV4 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC15.04■□□□□ -0
Trbc1A0A0A6YWV4 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Trbc1A0A0A6YWV4 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trbc1A0A0A6YWV4 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trbc1A0A0A6YWV4 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC15.03■□□□□ -0
Trbc1A0A0A6YWV4 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trbc1A0A0A6YWV4 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trbc1A0A0A6YWV4 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trbc1A0A0A6YWV4 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Trbc1A0A0A6YWV4 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trbc1A0A0A6YWV4 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC15.03■□□□□ -0
Trbc1A0A0A6YWV4 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Trbc1A0A0A6YWV4 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Trbc1A0A0A6YWV4 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trbc1A0A0A6YWV4 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC15.03■□□□□ -0
Trbc1A0A0A6YWV4 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trbc1A0A0A6YWV4 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC15.03■□□□□ -0
Trbc1A0A0A6YWV4 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms