Protein–RNA interactions for Protein: A0A075B6B9

Trav6d-5, T cell receptor alpha variable 6D-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-5A0A075B6B9 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav6d-5A0A075B6B9 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav6d-5A0A075B6B9 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav6d-5A0A075B6B9 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav6d-5A0A075B6B9 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav6d-5A0A075B6B9 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav6d-5A0A075B6B9 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trav6d-5A0A075B6B9 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav6d-5A0A075B6B9 Gm12896-201ENSMUST00000118430 226 ntBASIC13.26□□□□□ -0.29
Trav6d-5A0A075B6B9 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav6d-5A0A075B6B9 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trav6d-5A0A075B6B9 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC13.26□□□□□ -0.29
Trav6d-5A0A075B6B9 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav6d-5A0A075B6B9 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC13.26□□□□□ -0.29
Trav6d-5A0A075B6B9 Gm26571-201ENSMUST00000181399 666 ntBASIC13.26□□□□□ -0.29
Trav6d-5A0A075B6B9 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC13.26□□□□□ -0.29
Trav6d-5A0A075B6B9 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trav6d-5A0A075B6B9 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav6d-5A0A075B6B9 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav6d-5A0A075B6B9 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav6d-5A0A075B6B9 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav6d-5A0A075B6B9 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav6d-5A0A075B6B9 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trav6d-5A0A075B6B9 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav6d-5A0A075B6B9 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav6d-5A0A075B6B9 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav6d-5A0A075B6B9 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav6d-5A0A075B6B9 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav6d-5A0A075B6B9 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC13.26□□□□□ -0.29
Trav6d-5A0A075B6B9 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Trav6d-5A0A075B6B9 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Trav6d-5A0A075B6B9 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav6d-5A0A075B6B9 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC13.26□□□□□ -0.29
Trav6d-5A0A075B6B9 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Trav6d-5A0A075B6B9 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav6d-5A0A075B6B9 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav6d-5A0A075B6B9 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC13.25□□□□□ -0.29
Trav6d-5A0A075B6B9 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav6d-5A0A075B6B9 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC13.25□□□□□ -0.29
Trav6d-5A0A075B6B9 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav6d-5A0A075B6B9 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav6d-5A0A075B6B9 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav6d-5A0A075B6B9 Wnt10b-204ENSMUST00000226655 1807 ntBASIC13.25□□□□□ -0.29
Trav6d-5A0A075B6B9 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav6d-5A0A075B6B9 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trav6d-5A0A075B6B9 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
Trav6d-5A0A075B6B9 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Trav6d-5A0A075B6B9 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav6d-5A0A075B6B9 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav6d-5A0A075B6B9 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav6d-5A0A075B6B9 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trav6d-5A0A075B6B9 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trav6d-5A0A075B6B9 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trav6d-5A0A075B6B9 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav6d-5A0A075B6B9 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Trav6d-5A0A075B6B9 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC13.25□□□□□ -0.29
Trav6d-5A0A075B6B9 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav6d-5A0A075B6B9 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Trav6d-5A0A075B6B9 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav6d-5A0A075B6B9 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav6d-5A0A075B6B9 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav6d-5A0A075B6B9 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav6d-5A0A075B6B9 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav6d-5A0A075B6B9 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav6d-5A0A075B6B9 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav6d-5A0A075B6B9 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav6d-5A0A075B6B9 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav6d-5A0A075B6B9 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav6d-5A0A075B6B9 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav6d-5A0A075B6B9 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav6d-5A0A075B6B9 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav6d-5A0A075B6B9 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav6d-5A0A075B6B9 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav6d-5A0A075B6B9 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC13.24□□□□□ -0.29
Trav6d-5A0A075B6B9 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trav6d-5A0A075B6B9 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav6d-5A0A075B6B9 Gm18958-201ENSMUST00000174258 762 ntBASIC13.24□□□□□ -0.29
Trav6d-5A0A075B6B9 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Trav6d-5A0A075B6B9 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav6d-5A0A075B6B9 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav6d-5A0A075B6B9 AC163637.1-201ENSMUST00000215491 1894 ntBASIC13.24□□□□□ -0.29
Trav6d-5A0A075B6B9 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav6d-5A0A075B6B9 Gm14026-201ENSMUST00000120625 1789 ntBASIC13.24□□□□□ -0.29
Trav6d-5A0A075B6B9 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav6d-5A0A075B6B9 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trav6d-5A0A075B6B9 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav6d-5A0A075B6B9 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Trav6d-5A0A075B6B9 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav6d-5A0A075B6B9 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav6d-5A0A075B6B9 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav6d-5A0A075B6B9 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav6d-5A0A075B6B9 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav6d-5A0A075B6B9 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC13.24□□□□□ -0.29
Trav6d-5A0A075B6B9 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav6d-5A0A075B6B9 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav6d-5A0A075B6B9 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trav6d-5A0A075B6B9 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav6d-5A0A075B6B9 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav6d-5A0A075B6B9 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trav6d-5A0A075B6B9 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms