Protein–RNA interactions for Protein: A0A075B6B0

Trav6d-7, T cell receptor alpha variable 6D-7 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-7A0A075B6B0 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav6d-7A0A075B6B0 Gm10175-202ENSMUST00000208752 441 ntBASIC12.69□□□□□ -0.38
Trav6d-7A0A075B6B0 Gm18959-201ENSMUST00000208954 655 ntBASIC12.69□□□□□ -0.38
Trav6d-7A0A075B6B0 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
Trav6d-7A0A075B6B0 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav6d-7A0A075B6B0 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav6d-7A0A075B6B0 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Trav6d-7A0A075B6B0 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav6d-7A0A075B6B0 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav6d-7A0A075B6B0 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Trav6d-7A0A075B6B0 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav6d-7A0A075B6B0 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav6d-7A0A075B6B0 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trav6d-7A0A075B6B0 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav6d-7A0A075B6B0 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Trav6d-7A0A075B6B0 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav6d-7A0A075B6B0 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav6d-7A0A075B6B0 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav6d-7A0A075B6B0 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trav6d-7A0A075B6B0 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trav6d-7A0A075B6B0 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC12.68□□□□□ -0.38
Trav6d-7A0A075B6B0 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav6d-7A0A075B6B0 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav6d-7A0A075B6B0 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav6d-7A0A075B6B0 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav6d-7A0A075B6B0 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav6d-7A0A075B6B0 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav6d-7A0A075B6B0 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Trav6d-7A0A075B6B0 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav6d-7A0A075B6B0 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav6d-7A0A075B6B0 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav6d-7A0A075B6B0 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trav6d-7A0A075B6B0 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trav6d-7A0A075B6B0 Gm2274-201ENSMUST00000184539 609 ntBASIC12.68□□□□□ -0.38
Trav6d-7A0A075B6B0 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC12.68□□□□□ -0.38
Trav6d-7A0A075B6B0 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC12.68□□□□□ -0.38
Trav6d-7A0A075B6B0 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav6d-7A0A075B6B0 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trav6d-7A0A075B6B0 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC12.68□□□□□ -0.38
Trav6d-7A0A075B6B0 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC12.68□□□□□ -0.38
Trav6d-7A0A075B6B0 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trav6d-7A0A075B6B0 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav6d-7A0A075B6B0 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trav6d-7A0A075B6B0 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav6d-7A0A075B6B0 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav6d-7A0A075B6B0 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav6d-7A0A075B6B0 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trav6d-7A0A075B6B0 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav6d-7A0A075B6B0 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav6d-7A0A075B6B0 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav6d-7A0A075B6B0 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC12.67□□□□□ -0.38
Trav6d-7A0A075B6B0 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trav6d-7A0A075B6B0 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Trav6d-7A0A075B6B0 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trav6d-7A0A075B6B0 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC12.67□□□□□ -0.38
Trav6d-7A0A075B6B0 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC12.67□□□□□ -0.38
Trav6d-7A0A075B6B0 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trav6d-7A0A075B6B0 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC12.67□□□□□ -0.38
Trav6d-7A0A075B6B0 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav6d-7A0A075B6B0 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trav6d-7A0A075B6B0 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav6d-7A0A075B6B0 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trav6d-7A0A075B6B0 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav6d-7A0A075B6B0 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav6d-7A0A075B6B0 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav6d-7A0A075B6B0 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav6d-7A0A075B6B0 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav6d-7A0A075B6B0 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav6d-7A0A075B6B0 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC12.67□□□□□ -0.38
Trav6d-7A0A075B6B0 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav6d-7A0A075B6B0 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Trav6d-7A0A075B6B0 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav6d-7A0A075B6B0 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav6d-7A0A075B6B0 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Trav6d-7A0A075B6B0 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trav6d-7A0A075B6B0 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav6d-7A0A075B6B0 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav6d-7A0A075B6B0 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav6d-7A0A075B6B0 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav6d-7A0A075B6B0 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trav6d-7A0A075B6B0 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trav6d-7A0A075B6B0 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Trav6d-7A0A075B6B0 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC12.66□□□□□ -0.38
Trav6d-7A0A075B6B0 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav6d-7A0A075B6B0 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav6d-7A0A075B6B0 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trav6d-7A0A075B6B0 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav6d-7A0A075B6B0 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav6d-7A0A075B6B0 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Trav6d-7A0A075B6B0 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC12.66□□□□□ -0.38
Trav6d-7A0A075B6B0 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav6d-7A0A075B6B0 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Trav6d-7A0A075B6B0 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC12.66□□□□□ -0.38
Trav6d-7A0A075B6B0 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav6d-7A0A075B6B0 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC12.66□□□□□ -0.38
Trav6d-7A0A075B6B0 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC12.66□□□□□ -0.38
Trav6d-7A0A075B6B0 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Trav6d-7A0A075B6B0 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav6d-7A0A075B6B0 Gm43072-201ENSMUST00000200283 1671 ntBASIC12.66□□□□□ -0.38
Trav6d-7A0A075B6B0 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 45.1 ms