Protein–RNA interactions for Protein: A0A075B651

Trav4-4-dv10, T cell receptor alpha variable 4-4-DV10 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-4-dv10A0A075B651 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC12.78□□□□□ -0.36
Trav4-4-dv10A0A075B651 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC12.78□□□□□ -0.36
Trav4-4-dv10A0A075B651 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav4-4-dv10A0A075B651 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Trav4-4-dv10A0A075B651 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav4-4-dv10A0A075B651 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Trav4-4-dv10A0A075B651 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav4-4-dv10A0A075B651 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav4-4-dv10A0A075B651 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav4-4-dv10A0A075B651 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav4-4-dv10A0A075B651 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC12.78□□□□□ -0.36
Trav4-4-dv10A0A075B651 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trav4-4-dv10A0A075B651 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav4-4-dv10A0A075B651 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav4-4-dv10A0A075B651 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Trav4-4-dv10A0A075B651 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trav4-4-dv10A0A075B651 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav4-4-dv10A0A075B651 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trav4-4-dv10A0A075B651 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC12.77□□□□□ -0.36
Trav4-4-dv10A0A075B651 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trav4-4-dv10A0A075B651 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC12.77□□□□□ -0.36
Trav4-4-dv10A0A075B651 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trav4-4-dv10A0A075B651 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Trav4-4-dv10A0A075B651 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trav4-4-dv10A0A075B651 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trav4-4-dv10A0A075B651 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trav4-4-dv10A0A075B651 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trav4-4-dv10A0A075B651 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav4-4-dv10A0A075B651 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav4-4-dv10A0A075B651 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Trav4-4-dv10A0A075B651 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Trav4-4-dv10A0A075B651 Gm5643-201ENSMUST00000117081 966 ntBASIC12.77□□□□□ -0.37
Trav4-4-dv10A0A075B651 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC12.77□□□□□ -0.37
Trav4-4-dv10A0A075B651 Gm37856-201ENSMUST00000191634 999 ntBASIC12.77□□□□□ -0.37
Trav4-4-dv10A0A075B651 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav4-4-dv10A0A075B651 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav4-4-dv10A0A075B651 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Trav4-4-dv10A0A075B651 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav4-4-dv10A0A075B651 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC12.77□□□□□ -0.37
Trav4-4-dv10A0A075B651 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav4-4-dv10A0A075B651 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Trav4-4-dv10A0A075B651 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav4-4-dv10A0A075B651 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav4-4-dv10A0A075B651 AC154855.1-201ENSMUST00000227353 1458 ntBASIC12.77□□□□□ -0.37
Trav4-4-dv10A0A075B651 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav4-4-dv10A0A075B651 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC12.77□□□□□ -0.37
Trav4-4-dv10A0A075B651 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav4-4-dv10A0A075B651 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Trav4-4-dv10A0A075B651 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav4-4-dv10A0A075B651 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav4-4-dv10A0A075B651 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Trav4-4-dv10A0A075B651 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav4-4-dv10A0A075B651 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav4-4-dv10A0A075B651 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav4-4-dv10A0A075B651 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav4-4-dv10A0A075B651 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav4-4-dv10A0A075B651 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Trav4-4-dv10A0A075B651 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav4-4-dv10A0A075B651 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Trav4-4-dv10A0A075B651 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav4-4-dv10A0A075B651 Gm13181-201ENSMUST00000120117 1069 ntBASIC12.76□□□□□ -0.37
Trav4-4-dv10A0A075B651 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC12.76□□□□□ -0.37
Trav4-4-dv10A0A075B651 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC12.76□□□□□ -0.37
Trav4-4-dv10A0A075B651 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav4-4-dv10A0A075B651 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav4-4-dv10A0A075B651 Gm9867-201ENSMUST00000192212 2647 ntBASIC12.76□□□□□ -0.37
Trav4-4-dv10A0A075B651 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Trav4-4-dv10A0A075B651 Gm16011-201ENSMUST00000121567 2662 ntBASIC12.76□□□□□ -0.37
Trav4-4-dv10A0A075B651 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Trav4-4-dv10A0A075B651 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav4-4-dv10A0A075B651 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav4-4-dv10A0A075B651 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav4-4-dv10A0A075B651 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav4-4-dv10A0A075B651 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav4-4-dv10A0A075B651 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trav4-4-dv10A0A075B651 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav4-4-dv10A0A075B651 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav4-4-dv10A0A075B651 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav4-4-dv10A0A075B651 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
Trav4-4-dv10A0A075B651 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav4-4-dv10A0A075B651 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trav4-4-dv10A0A075B651 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav4-4-dv10A0A075B651 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav4-4-dv10A0A075B651 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav4-4-dv10A0A075B651 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav4-4-dv10A0A075B651 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav4-4-dv10A0A075B651 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trav4-4-dv10A0A075B651 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trav4-4-dv10A0A075B651 AC153526.5-201ENSMUST00000218661 2147 ntBASIC12.75□□□□□ -0.37
Trav4-4-dv10A0A075B651 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav4-4-dv10A0A075B651 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav4-4-dv10A0A075B651 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav4-4-dv10A0A075B651 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav4-4-dv10A0A075B651 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav4-4-dv10A0A075B651 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav4-4-dv10A0A075B651 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC12.75□□□□□ -0.37
Trav4-4-dv10A0A075B651 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav4-4-dv10A0A075B651 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Trav4-4-dv10A0A075B651 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav4-4-dv10A0A075B651 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms