Protein–RNA interactions for Protein: A0A075B648

Trav12-3, T cell receptor alpha variable 12-3 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-3A0A075B648 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav12-3A0A075B648 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav12-3A0A075B648 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav12-3A0A075B648 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav12-3A0A075B648 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav12-3A0A075B648 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC11.99□□□□□ -0.49
Trav12-3A0A075B648 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav12-3A0A075B648 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC11.99□□□□□ -0.49
Trav12-3A0A075B648 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav12-3A0A075B648 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav12-3A0A075B648 Gm44729-201ENSMUST00000206759 2052 ntBASIC11.99□□□□□ -0.49
Trav12-3A0A075B648 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav12-3A0A075B648 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav12-3A0A075B648 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC11.99□□□□□ -0.49
Trav12-3A0A075B648 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav12-3A0A075B648 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav12-3A0A075B648 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC11.98□□□□□ -0.49
Trav12-3A0A075B648 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC11.98□□□□□ -0.49
Trav12-3A0A075B648 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav12-3A0A075B648 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav12-3A0A075B648 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav12-3A0A075B648 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav12-3A0A075B648 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trav12-3A0A075B648 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Trav12-3A0A075B648 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trav12-3A0A075B648 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav12-3A0A075B648 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav12-3A0A075B648 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Trav12-3A0A075B648 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav12-3A0A075B648 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trav12-3A0A075B648 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC11.98□□□□□ -0.49
Trav12-3A0A075B648 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav12-3A0A075B648 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC11.98□□□□□ -0.49
Trav12-3A0A075B648 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav12-3A0A075B648 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Trav12-3A0A075B648 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav12-3A0A075B648 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav12-3A0A075B648 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC11.98□□□□□ -0.49
Trav12-3A0A075B648 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav12-3A0A075B648 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav12-3A0A075B648 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Trav12-3A0A075B648 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav12-3A0A075B648 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav12-3A0A075B648 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC11.98□□□□□ -0.49
Trav12-3A0A075B648 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav12-3A0A075B648 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav12-3A0A075B648 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav12-3A0A075B648 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC11.98□□□□□ -0.49
Trav12-3A0A075B648 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav12-3A0A075B648 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Trav12-3A0A075B648 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trav12-3A0A075B648 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav12-3A0A075B648 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC11.97□□□□□ -0.49
Trav12-3A0A075B648 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav12-3A0A075B648 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trav12-3A0A075B648 BC037039-201ENSMUST00000192003 2205 ntBASIC11.97□□□□□ -0.49
Trav12-3A0A075B648 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav12-3A0A075B648 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC11.97□□□□□ -0.49
Trav12-3A0A075B648 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav12-3A0A075B648 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC11.97□□□□□ -0.49
Trav12-3A0A075B648 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav12-3A0A075B648 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC11.97□□□□□ -0.49
Trav12-3A0A075B648 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav12-3A0A075B648 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Trav12-3A0A075B648 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Trav12-3A0A075B648 Gm9847-201ENSMUST00000052528 599 ntBASIC11.97□□□□□ -0.49
Trav12-3A0A075B648 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Trav12-3A0A075B648 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav12-3A0A075B648 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav12-3A0A075B648 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav12-3A0A075B648 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC11.97□□□□□ -0.49
Trav12-3A0A075B648 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav12-3A0A075B648 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav12-3A0A075B648 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav12-3A0A075B648 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC11.97□□□□□ -0.49
Trav12-3A0A075B648 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav12-3A0A075B648 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav12-3A0A075B648 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav12-3A0A075B648 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav12-3A0A075B648 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav12-3A0A075B648 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav12-3A0A075B648 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav12-3A0A075B648 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav12-3A0A075B648 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Trav12-3A0A075B648 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC11.96□□□□□ -0.49
Trav12-3A0A075B648 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav12-3A0A075B648 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC11.96□□□□□ -0.49
Trav12-3A0A075B648 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Trav12-3A0A075B648 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav12-3A0A075B648 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav12-3A0A075B648 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Trav12-3A0A075B648 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Trav12-3A0A075B648 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav12-3A0A075B648 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
Trav12-3A0A075B648 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav12-3A0A075B648 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav12-3A0A075B648 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
Trav12-3A0A075B648 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav12-3A0A075B648 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav12-3A0A075B648 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms