Protein–RNA interactions for Protein: A0A075B617

Trav16d-dv11, T cell receptor alpha variable 16D-DV11 (Fragment), mousemouse

Predictions only

Length 117 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16d-dv11A0A075B617 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
Trav16d-dv11A0A075B617 AL590614.2-201ENSMUST00000225374 1937 ntBASIC12.09□□□□□ -0.47
Trav16d-dv11A0A075B617 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav16d-dv11A0A075B617 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav16d-dv11A0A075B617 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav16d-dv11A0A075B617 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Trav16d-dv11A0A075B617 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav16d-dv11A0A075B617 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Trav16d-dv11A0A075B617 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav16d-dv11A0A075B617 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC12.09□□□□□ -0.47
Trav16d-dv11A0A075B617 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
Trav16d-dv11A0A075B617 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav16d-dv11A0A075B617 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav16d-dv11A0A075B617 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav16d-dv11A0A075B617 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav16d-dv11A0A075B617 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC12.09□□□□□ -0.47
Trav16d-dv11A0A075B617 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav16d-dv11A0A075B617 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav16d-dv11A0A075B617 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav16d-dv11A0A075B617 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC12.09□□□□□ -0.47
Trav16d-dv11A0A075B617 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav16d-dv11A0A075B617 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav16d-dv11A0A075B617 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav16d-dv11A0A075B617 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav16d-dv11A0A075B617 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.47
Trav16d-dv11A0A075B617 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Trav16d-dv11A0A075B617 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC12.08□□□□□ -0.47
Trav16d-dv11A0A075B617 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav16d-dv11A0A075B617 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav16d-dv11A0A075B617 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav16d-dv11A0A075B617 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav16d-dv11A0A075B617 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trav16d-dv11A0A075B617 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav16d-dv11A0A075B617 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav16d-dv11A0A075B617 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav16d-dv11A0A075B617 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav16d-dv11A0A075B617 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav16d-dv11A0A075B617 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trav16d-dv11A0A075B617 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav16d-dv11A0A075B617 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Trav16d-dv11A0A075B617 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC12.08□□□□□ -0.48
Trav16d-dv11A0A075B617 Mir6349-201ENSMUST00000184059 97 ntBASIC12.08□□□□□ -0.48
Trav16d-dv11A0A075B617 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC12.08□□□□□ -0.48
Trav16d-dv11A0A075B617 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC12.08□□□□□ -0.48
Trav16d-dv11A0A075B617 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trav16d-dv11A0A075B617 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav16d-dv11A0A075B617 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trav16d-dv11A0A075B617 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav16d-dv11A0A075B617 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav16d-dv11A0A075B617 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav16d-dv11A0A075B617 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC12.08□□□□□ -0.48
Trav16d-dv11A0A075B617 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav16d-dv11A0A075B617 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav16d-dv11A0A075B617 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC12.08□□□□□ -0.48
Trav16d-dv11A0A075B617 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav16d-dv11A0A075B617 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav16d-dv11A0A075B617 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trav16d-dv11A0A075B617 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav16d-dv11A0A075B617 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC12.08□□□□□ -0.48
Trav16d-dv11A0A075B617 Prob1-201ENSMUST00000097619 3021 ntBASIC12.08□□□□□ -0.48
Trav16d-dv11A0A075B617 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav16d-dv11A0A075B617 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav16d-dv11A0A075B617 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trav16d-dv11A0A075B617 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav16d-dv11A0A075B617 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Trav16d-dv11A0A075B617 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Trav16d-dv11A0A075B617 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav16d-dv11A0A075B617 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav16d-dv11A0A075B617 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav16d-dv11A0A075B617 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav16d-dv11A0A075B617 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav16d-dv11A0A075B617 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC12.07□□□□□ -0.48
Trav16d-dv11A0A075B617 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav16d-dv11A0A075B617 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC12.07□□□□□ -0.48
Trav16d-dv11A0A075B617 Gm6576-201ENSMUST00000169678 883 ntBASIC12.07□□□□□ -0.48
Trav16d-dv11A0A075B617 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
Trav16d-dv11A0A075B617 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC12.07□□□□□ -0.48
Trav16d-dv11A0A075B617 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav16d-dv11A0A075B617 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav16d-dv11A0A075B617 Gm44549-201ENSMUST00000208351 577 ntBASIC12.07□□□□□ -0.48
Trav16d-dv11A0A075B617 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav16d-dv11A0A075B617 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav16d-dv11A0A075B617 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav16d-dv11A0A075B617 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trav16d-dv11A0A075B617 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC12.07□□□□□ -0.48
Trav16d-dv11A0A075B617 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav16d-dv11A0A075B617 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav16d-dv11A0A075B617 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trav16d-dv11A0A075B617 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav16d-dv11A0A075B617 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC12.07□□□□□ -0.48
Trav16d-dv11A0A075B617 Gm10710-201ENSMUST00000047876 3971 ntBASIC12.07□□□□□ -0.48
Trav16d-dv11A0A075B617 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trav16d-dv11A0A075B617 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC12.07□□□□□ -0.48
Trav16d-dv11A0A075B617 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav16d-dv11A0A075B617 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trav16d-dv11A0A075B617 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav16d-dv11A0A075B617 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav16d-dv11A0A075B617 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav16d-dv11A0A075B617 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC12.06□□□□□ -0.48
Trav16d-dv11A0A075B617 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms