Protein–RNA interactions for Protein: A0A075B601

Trav9-1, T cell receptor alpha variable 9-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9-1A0A075B601 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav9-1A0A075B601 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav9-1A0A075B601 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trav9-1A0A075B601 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav9-1A0A075B601 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
Trav9-1A0A075B601 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav9-1A0A075B601 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav9-1A0A075B601 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav9-1A0A075B601 Gfra2-202ENSMUST00000227633 1480 ntBASIC12.81□□□□□ -0.36
Trav9-1A0A075B601 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Trav9-1A0A075B601 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav9-1A0A075B601 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav9-1A0A075B601 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav9-1A0A075B601 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC12.81□□□□□ -0.36
Trav9-1A0A075B601 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC12.81□□□□□ -0.36
Trav9-1A0A075B601 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC12.81□□□□□ -0.36
Trav9-1A0A075B601 Mir5122-201ENSMUST00000175004 89 ntBASIC12.81□□□□□ -0.36
Trav9-1A0A075B601 Gm4217-201ENSMUST00000182243 1002 ntBASIC12.81□□□□□ -0.36
Trav9-1A0A075B601 Gm43353-201ENSMUST00000199224 1295 ntBASIC12.81□□□□□ -0.36
Trav9-1A0A075B601 AC069562.2-201ENSMUST00000224644 2146 ntBASIC12.81□□□□□ -0.36
Trav9-1A0A075B601 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Trav9-1A0A075B601 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav9-1A0A075B601 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav9-1A0A075B601 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav9-1A0A075B601 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Trav9-1A0A075B601 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav9-1A0A075B601 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav9-1A0A075B601 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav9-1A0A075B601 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Trav9-1A0A075B601 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trav9-1A0A075B601 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trav9-1A0A075B601 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav9-1A0A075B601 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav9-1A0A075B601 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav9-1A0A075B601 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav9-1A0A075B601 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav9-1A0A075B601 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav9-1A0A075B601 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC12.8□□□□□ -0.36
Trav9-1A0A075B601 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trav9-1A0A075B601 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Trav9-1A0A075B601 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav9-1A0A075B601 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Trav9-1A0A075B601 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav9-1A0A075B601 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trav9-1A0A075B601 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav9-1A0A075B601 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav9-1A0A075B601 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav9-1A0A075B601 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav9-1A0A075B601 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trav9-1A0A075B601 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav9-1A0A075B601 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav9-1A0A075B601 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav9-1A0A075B601 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav9-1A0A075B601 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Trav9-1A0A075B601 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav9-1A0A075B601 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav9-1A0A075B601 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav9-1A0A075B601 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC12.8□□□□□ -0.36
Trav9-1A0A075B601 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav9-1A0A075B601 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav9-1A0A075B601 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav9-1A0A075B601 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav9-1A0A075B601 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav9-1A0A075B601 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Trav9-1A0A075B601 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Trav9-1A0A075B601 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC12.79□□□□□ -0.36
Trav9-1A0A075B601 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC12.79□□□□□ -0.36
Trav9-1A0A075B601 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav9-1A0A075B601 Gm27463-201ENSMUST00000183569 57 ntBASIC12.79□□□□□ -0.36
Trav9-1A0A075B601 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trav9-1A0A075B601 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC12.79□□□□□ -0.36
Trav9-1A0A075B601 Gm21814-202ENSMUST00000203277 873 ntBASIC12.79□□□□□ -0.36
Trav9-1A0A075B601 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav9-1A0A075B601 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav9-1A0A075B601 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav9-1A0A075B601 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trav9-1A0A075B601 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav9-1A0A075B601 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav9-1A0A075B601 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav9-1A0A075B601 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav9-1A0A075B601 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav9-1A0A075B601 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Trav9-1A0A075B601 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC12.79□□□□□ -0.36
Trav9-1A0A075B601 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav9-1A0A075B601 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav9-1A0A075B601 Gm42918-201ENSMUST00000199249 1580 ntBASIC12.78□□□□□ -0.36
Trav9-1A0A075B601 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC12.78□□□□□ -0.36
Trav9-1A0A075B601 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav9-1A0A075B601 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Trav9-1A0A075B601 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC12.78□□□□□ -0.36
Trav9-1A0A075B601 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav9-1A0A075B601 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav9-1A0A075B601 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Trav9-1A0A075B601 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Trav9-1A0A075B601 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav9-1A0A075B601 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trav9-1A0A075B601 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav9-1A0A075B601 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC12.78□□□□□ -0.36
Trav9-1A0A075B601 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav9-1A0A075B601 Gm5297-201ENSMUST00000198555 1171 ntBASIC12.78□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms