Protein–RNA interactions for Protein: A0A075B5Z8

Trav6-1, T cell receptor alpha variable 6-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-1A0A075B5Z8 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav6-1A0A075B5Z8 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav6-1A0A075B5Z8 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Trav6-1A0A075B5Z8 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Trav6-1A0A075B5Z8 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav6-1A0A075B5Z8 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Trav6-1A0A075B5Z8 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Trav6-1A0A075B5Z8 Gm7712-202ENSMUST00000222331 1510 ntBASIC13.18□□□□□ -0.3
Trav6-1A0A075B5Z8 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC13.18□□□□□ -0.3
Trav6-1A0A075B5Z8 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav6-1A0A075B5Z8 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav6-1A0A075B5Z8 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trav6-1A0A075B5Z8 Ntrk2-205ENSMUST00000224402 2284 ntBASIC13.18□□□□□ -0.3
Trav6-1A0A075B5Z8 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav6-1A0A075B5Z8 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trav6-1A0A075B5Z8 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav6-1A0A075B5Z8 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav6-1A0A075B5Z8 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav6-1A0A075B5Z8 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trav6-1A0A075B5Z8 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trav6-1A0A075B5Z8 Trmt13-210ENSMUST00000198454 880 ntBASIC13.18□□□□□ -0.3
Trav6-1A0A075B5Z8 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Trav6-1A0A075B5Z8 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC13.18□□□□□ -0.3
Trav6-1A0A075B5Z8 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav6-1A0A075B5Z8 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav6-1A0A075B5Z8 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav6-1A0A075B5Z8 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav6-1A0A075B5Z8 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav6-1A0A075B5Z8 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav6-1A0A075B5Z8 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trav6-1A0A075B5Z8 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav6-1A0A075B5Z8 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav6-1A0A075B5Z8 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav6-1A0A075B5Z8 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trav6-1A0A075B5Z8 Prob1-201ENSMUST00000097619 3021 ntBASIC13.18□□□□□ -0.3
Trav6-1A0A075B5Z8 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trav6-1A0A075B5Z8 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav6-1A0A075B5Z8 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav6-1A0A075B5Z8 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav6-1A0A075B5Z8 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav6-1A0A075B5Z8 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav6-1A0A075B5Z8 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav6-1A0A075B5Z8 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Trav6-1A0A075B5Z8 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav6-1A0A075B5Z8 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trav6-1A0A075B5Z8 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav6-1A0A075B5Z8 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trav6-1A0A075B5Z8 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav6-1A0A075B5Z8 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC13.17□□□□□ -0.3
Trav6-1A0A075B5Z8 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC13.17□□□□□ -0.3
Trav6-1A0A075B5Z8 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC13.17□□□□□ -0.3
Trav6-1A0A075B5Z8 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav6-1A0A075B5Z8 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav6-1A0A075B5Z8 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav6-1A0A075B5Z8 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav6-1A0A075B5Z8 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trav6-1A0A075B5Z8 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Trav6-1A0A075B5Z8 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav6-1A0A075B5Z8 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC13.16□□□□□ -0.3
Trav6-1A0A075B5Z8 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav6-1A0A075B5Z8 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav6-1A0A075B5Z8 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trav6-1A0A075B5Z8 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav6-1A0A075B5Z8 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav6-1A0A075B5Z8 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav6-1A0A075B5Z8 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav6-1A0A075B5Z8 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav6-1A0A075B5Z8 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Trav6-1A0A075B5Z8 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav6-1A0A075B5Z8 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav6-1A0A075B5Z8 Gm5643-201ENSMUST00000117081 966 ntBASIC13.16□□□□□ -0.3
Trav6-1A0A075B5Z8 Gm12441-201ENSMUST00000121806 588 ntBASIC13.16□□□□□ -0.3
Trav6-1A0A075B5Z8 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC13.16□□□□□ -0.3
Trav6-1A0A075B5Z8 Gm37856-201ENSMUST00000191634 999 ntBASIC13.16□□□□□ -0.3
Trav6-1A0A075B5Z8 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC13.16□□□□□ -0.3
Trav6-1A0A075B5Z8 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC13.16□□□□□ -0.3
Trav6-1A0A075B5Z8 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav6-1A0A075B5Z8 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav6-1A0A075B5Z8 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav6-1A0A075B5Z8 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC13.16□□□□□ -0.3
Trav6-1A0A075B5Z8 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav6-1A0A075B5Z8 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav6-1A0A075B5Z8 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC13.16□□□□□ -0.3
Trav6-1A0A075B5Z8 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC13.16□□□□□ -0.3
Trav6-1A0A075B5Z8 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trav6-1A0A075B5Z8 Ccdc166-201ENSMUST00000182172 2584 ntBASIC13.16□□□□□ -0.3
Trav6-1A0A075B5Z8 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav6-1A0A075B5Z8 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav6-1A0A075B5Z8 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav6-1A0A075B5Z8 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC13.15□□□□□ -0.3
Trav6-1A0A075B5Z8 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Trav6-1A0A075B5Z8 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav6-1A0A075B5Z8 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav6-1A0A075B5Z8 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Trav6-1A0A075B5Z8 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Trav6-1A0A075B5Z8 Gm13181-201ENSMUST00000120117 1069 ntBASIC13.15□□□□□ -0.3
Trav6-1A0A075B5Z8 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC13.15□□□□□ -0.3
Trav6-1A0A075B5Z8 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav6-1A0A075B5Z8 Gm7791-201ENSMUST00000219066 539 ntBASIC13.15□□□□□ -0.3
Trav6-1A0A075B5Z8 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms