Protein–RNA interactions for Protein: Q9BT23

LIMD2, LIM domain-containing protein 2, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2Q9BT23 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC1.72□□□□□ -2.13
LIMD2Q9BT23 RPS23P3-201ENST00000470993 430 ntBASIC1.72□□□□□ -2.13
LIMD2Q9BT23 RPL7P49-201ENST00000471402 708 ntBASIC1.72□□□□□ -2.13
LIMD2Q9BT23 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
LIMD2Q9BT23 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC1.72□□□□□ -2.13
LIMD2Q9BT23 AC107398.1-201ENST00000486904 505 ntBASIC1.72□□□□□ -2.13
LIMD2Q9BT23 MTND3P24-201ENST00000506306 329 ntBASIC1.72□□□□□ -2.13
LIMD2Q9BT23 AC117522.3-201ENST00000507974 584 ntBASIC1.72□□□□□ -2.13
LIMD2Q9BT23 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC1.72□□□□□ -2.13
LIMD2Q9BT23 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC1.72□□□□□ -2.13
LIMD2Q9BT23 RNU6-491P-201ENST00000516099 110 ntBASIC1.72□□□□□ -2.13
LIMD2Q9BT23 OR5G4P-201ENST00000525251 760 ntBASIC1.72□□□□□ -2.13
LIMD2Q9BT23 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
LIMD2Q9BT23 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
LIMD2Q9BT23 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC1.72□□□□□ -2.13
LIMD2Q9BT23 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC1.72□□□□□ -2.13
LIMD2Q9BT23 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC1.72□□□□□ -2.13
LIMD2Q9BT23 ACTR3BP3-201ENST00000565577 979 ntBASIC1.72□□□□□ -2.13
LIMD2Q9BT23 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC1.72□□□□□ -2.13
LIMD2Q9BT23 MTCYBP28-201ENST00000566728 1132 ntBASIC1.72□□□□□ -2.13
LIMD2Q9BT23 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC1.72□□□□□ -2.13
LIMD2Q9BT23 UBL5P2-201ENST00000583788 219 ntBASIC1.72□□□□□ -2.13
LIMD2Q9BT23 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC1.72□□□□□ -2.13
LIMD2Q9BT23 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC1.72□□□□□ -2.13
LIMD2Q9BT23 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC1.72□□□□□ -2.13
LIMD2Q9BT23 AC012493.2-201ENST00000595083 291 ntBASIC1.72□□□□□ -2.13
LIMD2Q9BT23 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC1.72□□□□□ -2.13
LIMD2Q9BT23 AC245036.5-201ENST00000596330 847 ntBASIC1.72□□□□□ -2.13
LIMD2Q9BT23 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC1.72□□□□□ -2.13
LIMD2Q9BT23 AL009028.1-201ENST00000604895 802 ntBASIC1.72□□□□□ -2.13
LIMD2Q9BT23 BNIP3P7-201ENST00000605641 516 ntBASIC1.72□□□□□ -2.13
LIMD2Q9BT23 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC1.72□□□□□ -2.13
LIMD2Q9BT23 AC104237.2-201ENST00000612456 443 ntBASIC1.72□□□□□ -2.13
LIMD2Q9BT23 AC011890.2-201ENST00000613393 294 ntBASIC1.72□□□□□ -2.13
LIMD2Q9BT23 MIR6895-201ENST00000613497 78 ntBASIC1.72□□□□□ -2.13
LIMD2Q9BT23 AC018755.4-201ENST00000619715 454 ntBASIC1.72□□□□□ -2.13
LIMD2Q9BT23 AC024023.1-201ENST00000624530 922 ntBASIC1.72□□□□□ -2.13
LIMD2Q9BT23 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC1.72□□□□□ -2.13
LIMD2Q9BT23 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC1.72□□□□□ -2.13
LIMD2Q9BT23 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC1.72□□□□□ -2.13
LIMD2Q9BT23 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.72□□□□□ -2.13
LIMD2Q9BT23 AC099654.7-201ENST00000635788 2127 ntBASIC1.72□□□□□ -2.13
LIMD2Q9BT23 ANKRD18EP-201ENST00000405487 2632 ntBASIC1.71□□□□□ -2.13
LIMD2Q9BT23 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
LIMD2Q9BT23 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
LIMD2Q9BT23 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC1.71□□□□□ -2.14
LIMD2Q9BT23 SNORA25.6-201ENST00000364121 118 ntBASIC1.71□□□□□ -2.14
LIMD2Q9BT23 SNORA67.1-201ENST00000364749 141 ntBASIC1.71□□□□□ -2.14
LIMD2Q9BT23 RNU1-140P-201ENST00000365040 165 ntBASIC1.71□□□□□ -2.14
LIMD2Q9BT23 SNORA48.7-201ENST00000391302 135 ntBASIC1.71□□□□□ -2.14
LIMD2Q9BT23 RN7SKP27-201ENST00000410684 333 ntBASIC1.71□□□□□ -2.14
LIMD2Q9BT23 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC1.71□□□□□ -2.14
LIMD2Q9BT23 AL389915.1-201ENST00000422463 466 ntBASIC1.71□□□□□ -2.14
LIMD2Q9BT23 AC006548.1-201ENST00000427470 102 ntBASIC1.71□□□□□ -2.14
LIMD2Q9BT23 AL513321.1-201ENST00000441175 761 ntBASIC1.71□□□□□ -2.14
LIMD2Q9BT23 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC1.71□□□□□ -2.14
LIMD2Q9BT23 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC1.71□□□□□ -2.14
LIMD2Q9BT23 SETP11-201ENST00000473027 690 ntBASIC1.71□□□□□ -2.14
LIMD2Q9BT23 RAD51AP1P1-201ENST00000484195 1001 ntBASIC1.71□□□□□ -2.14
LIMD2Q9BT23 AP000926.3-201ENST00000497201 299 ntBASIC1.71□□□□□ -2.14
LIMD2Q9BT23 AC025459.1-201ENST00000504072 156 ntBASIC1.71□□□□□ -2.14
LIMD2Q9BT23 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC1.71□□□□□ -2.14
LIMD2Q9BT23 AC008716.1-201ENST00000511084 513 ntBASIC1.71□□□□□ -2.14
LIMD2Q9BT23 RN7SKP283-201ENST00000517197 270 ntBASIC1.71□□□□□ -2.14
LIMD2Q9BT23 RNU1-104P-201ENST00000517280 175 ntBASIC1.71□□□□□ -2.14
LIMD2Q9BT23 HMGB1P41-201ENST00000520234 440 ntBASIC1.71□□□□□ -2.14
LIMD2Q9BT23 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC1.71□□□□□ -2.14
LIMD2Q9BT23 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC1.71□□□□□ -2.14
LIMD2Q9BT23 ERHP1-201ENST00000523006 310 ntBASIC1.71□□□□□ -2.14
LIMD2Q9BT23 PSMA2P1-201ENST00000526365 646 ntBASIC1.71□□□□□ -2.14
LIMD2Q9BT23 RGS4-207ENST00000527809 817 ntTSL 4 BASIC1.71□□□□□ -2.14
LIMD2Q9BT23 AP003385.6-201ENST00000531603 374 ntBASIC1.71□□□□□ -2.14
LIMD2Q9BT23 AP000857.1-201ENST00000532151 543 ntBASIC1.71□□□□□ -2.14
LIMD2Q9BT23 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC1.71□□□□□ -2.14
LIMD2Q9BT23 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC1.71□□□□□ -2.14
LIMD2Q9BT23 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC1.71□□□□□ -2.14
LIMD2Q9BT23 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC1.71□□□□□ -2.14
LIMD2Q9BT23 RPL21P12-201ENST00000559810 515 ntBASIC1.71□□□□□ -2.14
LIMD2Q9BT23 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC1.71□□□□□ -2.14
LIMD2Q9BT23 AC034105.3-201ENST00000565294 442 ntBASIC1.71□□□□□ -2.14
LIMD2Q9BT23 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC1.71□□□□□ -2.14
LIMD2Q9BT23 MIR3605-201ENST00000583214 100 ntBASIC1.71□□□□□ -2.14
LIMD2Q9BT23 AC006539.2-201ENST00000601729 572 ntBASIC1.71□□□□□ -2.14
LIMD2Q9BT23 AC092474.3-201ENST00000603022 568 ntBASIC1.71□□□□□ -2.14
LIMD2Q9BT23 NUTF2P8-201ENST00000604593 363 ntBASIC1.71□□□□□ -2.14
LIMD2Q9BT23 AC106791.2-201ENST00000604680 391 ntBASIC1.71□□□□□ -2.14
LIMD2Q9BT23 AC073111.2-201ENST00000605657 1075 ntBASIC1.71□□□□□ -2.14
LIMD2Q9BT23 AL162574.2-201ENST00000614618 657 ntBASIC1.71□□□□□ -2.14
LIMD2Q9BT23 AC103798.2-201ENST00000624292 632 ntBASIC1.71□□□□□ -2.14
LIMD2Q9BT23 AC009039.2-201ENST00000624524 529 ntBASIC1.71□□□□□ -2.14
LIMD2Q9BT23 CR381572.1-201ENST00000625098 102 ntBASIC1.71□□□□□ -2.14
LIMD2Q9BT23 TEX41-300ENST00000631048 69 ntTSL 5 BASIC1.71□□□□□ -2.14
LIMD2Q9BT23 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
LIMD2Q9BT23 IL33-203ENST00000456383 2501 ntTSL 5 BASIC1.71□□□□□ -2.14
LIMD2Q9BT23 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
LIMD2Q9BT23 AGL-204ENST00000370161 6923 ntTSL 5 BASIC1.7□□□□□ -2.14
LIMD2Q9BT23 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC1.7□□□□□ -2.14
LIMD2Q9BT23 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC1.7□□□□□ -2.14
LIMD2Q9BT23 ASNSP3-201ENST00000451989 1306 ntBASIC1.7□□□□□ -2.14
LIMD2Q9BT23 OFD1P6Y-202ENST00000451061 2724 ntBASIC1.7□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 82.6 ms