Protein–RNA interactions for Protein: Q96RK1

CITED4, Cbp/p300-interacting transactivator 4, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CITED4Q96RK1 MRPL42P3-201ENST00000401492 326 ntBASIC5.2□□□□□ -1.58
CITED4Q96RK1 FABP6-202ENST00000402432 572 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
CITED4Q96RK1 AC104463.1-201ENST00000411431 365 ntTSL 5 BASIC5.2□□□□□ -1.58
CITED4Q96RK1 AL513331.1-201ENST00000411908 397 ntBASIC5.2□□□□□ -1.58
CITED4Q96RK1 UBE2V1P14-201ENST00000415815 558 ntBASIC5.2□□□□□ -1.58
CITED4Q96RK1 EIF4EP1-201ENST00000422311 642 ntBASIC5.2□□□□□ -1.58
CITED4Q96RK1 RSL24D1P6-201ENST00000426934 401 ntBASIC5.2□□□□□ -1.58
CITED4Q96RK1 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC5.2□□□□□ -1.58
CITED4Q96RK1 USP9YP30-201ENST00000430729 455 ntBASIC5.2□□□□□ -1.58
CITED4Q96RK1 AC012668.2-201ENST00000431727 503 ntTSL 3 BASIC5.2□□□□□ -1.58
CITED4Q96RK1 AC073063.1-201ENST00000434352 607 ntBASIC5.2□□□□□ -1.58
CITED4Q96RK1 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC5.2□□□□□ -1.58
CITED4Q96RK1 RPL12P25-201ENST00000455592 494 ntBASIC5.2□□□□□ -1.58
CITED4Q96RK1 AC018638.3-201ENST00000461273 132 ntBASIC5.2□□□□□ -1.58
CITED4Q96RK1 RN7SL515P-201ENST00000463999 297 ntBASIC5.2□□□□□ -1.58
CITED4Q96RK1 RN7SL197P-201ENST00000466981 299 ntBASIC5.2□□□□□ -1.58
CITED4Q96RK1 LINC01596-201ENST00000503609 592 ntTSL 2 BASIC5.2□□□□□ -1.58
CITED4Q96RK1 B4GALNT2P1-201ENST00000508857 307 ntBASIC5.2□□□□□ -1.58
CITED4Q96RK1 SNORA31.20-201ENST00000517111 133 ntBASIC5.2□□□□□ -1.58
CITED4Q96RK1 CDH12P4-201ENST00000517835 295 ntBASIC5.2□□□□□ -1.58
CITED4Q96RK1 CDH12P3-201ENST00000517935 295 ntBASIC5.2□□□□□ -1.58
CITED4Q96RK1 CDH12P1-201ENST00000518435 295 ntBASIC5.2□□□□□ -1.58
CITED4Q96RK1 AC104576.1-201ENST00000524225 88 ntBASIC5.2□□□□□ -1.58
CITED4Q96RK1 TRIM77BP-201ENST00000524985 1119 ntBASIC5.2□□□□□ -1.58
CITED4Q96RK1 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC5.2□□□□□ -1.58
CITED4Q96RK1 AP000676.2-201ENST00000529711 301 ntBASIC5.2□□□□□ -1.58
CITED4Q96RK1 DCN-210ENST00000547568 823 ntTSL 3 BASIC5.2□□□□□ -1.58
CITED4Q96RK1 LINC02406-201ENST00000553029 546 ntTSL 3 BASIC5.2□□□□□ -1.58
CITED4Q96RK1 AC026462.3-201ENST00000565153 557 ntTSL 2 BASIC5.2□□□□□ -1.58
CITED4Q96RK1 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC5.2□□□□□ -1.58
CITED4Q96RK1 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC5.2□□□□□ -1.58
CITED4Q96RK1 PRPF19P1-201ENST00000584766 898 ntBASIC5.2□□□□□ -1.58
CITED4Q96RK1 AP2S1-210ENST00000601649 315 ntTSL 3 BASIC5.2□□□□□ -1.58
CITED4Q96RK1 AL161423.1-201ENST00000613700 262 ntBASIC5.2□□□□□ -1.58
CITED4Q96RK1 AC034102.8-201ENST00000615146 484 ntBASIC5.2□□□□□ -1.58
CITED4Q96RK1 AL512652.1-201ENST00000619006 500 ntBASIC5.2□□□□□ -1.58
CITED4Q96RK1 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC5.2□□□□□ -1.58
CITED4Q96RK1 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC5.2□□□□□ -1.58
CITED4Q96RK1 AL031601.2-202ENST00000622650 282 ntBASIC5.2□□□□□ -1.58
CITED4Q96RK1 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
CITED4Q96RK1 Z99571.1-201ENST00000636677 394 ntBASIC5.2□□□□□ -1.58
CITED4Q96RK1 TANK-205ENST00000405852 2155 ntTSL 5 BASIC5.2□□□□□ -1.58
CITED4Q96RK1 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC5.2□□□□□ -1.58
CITED4Q96RK1 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC5.2□□□□□ -1.58
CITED4Q96RK1 ZNF329-201ENST00000358067 3290 ntAPPRIS P1 TSL 2 BASIC5.2□□□□□ -1.58
CITED4Q96RK1 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
CITED4Q96RK1 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC5.2□□□□□ -1.58
CITED4Q96RK1 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
CITED4Q96RK1 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CITED4Q96RK1 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC5.2□□□□□ -1.58
CITED4Q96RK1 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC5.2□□□□□ -1.58
CITED4Q96RK1 AC112198.2-201ENST00000426589 6996 ntBASIC5.2□□□□□ -1.58
CITED4Q96RK1 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
CITED4Q96RK1 AC011755.1-201ENST00000623763 2049 ntBASIC5.19□□□□□ -1.58
CITED4Q96RK1 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
CITED4Q96RK1 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CITED4Q96RK1 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
CITED4Q96RK1 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
CITED4Q96RK1 LIMA1-202ENST00000394943 3669 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
CITED4Q96RK1 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CITED4Q96RK1 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC5.19□□□□□ -1.58
CITED4Q96RK1 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC5.19□□□□□ -1.58
CITED4Q96RK1 AL359922.3-201ENST00000624779 1670 ntBASIC5.19□□□□□ -1.58
CITED4Q96RK1 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CITED4Q96RK1 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CITED4Q96RK1 CROT-204ENST00000442291 1993 ntTSL 5 BASIC5.19□□□□□ -1.58
CITED4Q96RK1 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC5.19□□□□□ -1.58
CITED4Q96RK1 Y_RNA.133-201ENST00000363428 110 ntBASIC5.19□□□□□ -1.58
CITED4Q96RK1 Y_RNA.158-201ENST00000363651 101 ntBASIC5.19□□□□□ -1.58
CITED4Q96RK1 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
CITED4Q96RK1 Y_RNA.463-201ENST00000384271 102 ntBASIC5.19□□□□□ -1.58
CITED4Q96RK1 MIR578-201ENST00000384828 96 ntBASIC5.19□□□□□ -1.58
CITED4Q96RK1 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CITED4Q96RK1 DPPA2P3-201ENST00000411853 655 ntBASIC5.19□□□□□ -1.58
CITED4Q96RK1 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC5.19□□□□□ -1.58
CITED4Q96RK1 RPL18AP14-201ENST00000417685 526 ntBASIC5.19□□□□□ -1.58
CITED4Q96RK1 PTPN2P1-201ENST00000423212 1072 ntBASIC5.19□□□□□ -1.58
CITED4Q96RK1 AL358176.2-201ENST00000425769 204 ntBASIC5.19□□□□□ -1.58
CITED4Q96RK1 HMGB1P9-201ENST00000429856 646 ntBASIC5.19□□□□□ -1.58
CITED4Q96RK1 AC073257.1-201ENST00000432474 523 ntTSL 4 BASIC5.19□□□□□ -1.58
CITED4Q96RK1 RHOT1P3-201ENST00000436571 331 ntBASIC5.19□□□□□ -1.58
CITED4Q96RK1 PTMAP6-201ENST00000439110 327 ntBASIC5.19□□□□□ -1.58
CITED4Q96RK1 AC009948.1-203ENST00000450044 793 ntTSL 3 BASIC5.19□□□□□ -1.58
CITED4Q96RK1 AL354714.5-201ENST00000450131 590 ntBASIC5.19□□□□□ -1.58
CITED4Q96RK1 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC5.19□□□□□ -1.58
CITED4Q96RK1 AC099670.1-201ENST00000455141 783 ntBASIC5.19□□□□□ -1.58
CITED4Q96RK1 RN7SL492P-201ENST00000460700 295 ntBASIC5.19□□□□□ -1.58
CITED4Q96RK1 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC5.19□□□□□ -1.58
CITED4Q96RK1 AL135752.1-201ENST00000479477 471 ntBASIC5.19□□□□□ -1.58
CITED4Q96RK1 AC026979.1-201ENST00000492525 396 ntBASIC5.19□□□□□ -1.58
CITED4Q96RK1 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC5.19□□□□□ -1.58
CITED4Q96RK1 RNU6-470P-201ENST00000515954 104 ntBASIC5.19□□□□□ -1.58
CITED4Q96RK1 RNA5SP473-201ENST00000516402 125 ntBASIC5.19□□□□□ -1.58
CITED4Q96RK1 AC018442.2-201ENST00000523658 648 ntTSL 3 BASIC5.19□□□□□ -1.58
CITED4Q96RK1 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
CITED4Q96RK1 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CITED4Q96RK1 PCED1B-AS1-202ENST00000547600 523 ntTSL 3 BASIC5.19□□□□□ -1.58
CITED4Q96RK1 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC5.19□□□□□ -1.58
CITED4Q96RK1 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC5.19□□□□□ -1.58
CITED4Q96RK1 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC5.19□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 112.1 ms