Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 RNA5SP252-201ENST00000391131 119 ntBASIC2.38□□□□□ -2.03
CCDC58Q4VC31 MTND1P23-201ENST00000416931 372 ntBASIC2.38□□□□□ -2.03
CCDC58Q4VC31 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
CCDC58Q4VC31 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
CCDC58Q4VC31 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
CCDC58Q4VC31 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC2.38□□□□□ -2.03
CCDC58Q4VC31 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
CCDC58Q4VC31 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC2.38□□□□□ -2.03
CCDC58Q4VC31 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC2.38□□□□□ -2.03
CCDC58Q4VC31 RPL6P5-201ENST00000445678 828 ntBASIC2.38□□□□□ -2.03
CCDC58Q4VC31 snoU13.4-201ENST00000458916 104 ntBASIC2.38□□□□□ -2.03
CCDC58Q4VC31 POMP-202ENST00000460403 1428 ntTSL 3 BASIC2.38□□□□□ -2.03
CCDC58Q4VC31 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC2.38□□□□□ -2.03
CCDC58Q4VC31 RPS4XP6-201ENST00000477670 797 ntBASIC2.38□□□□□ -2.03
CCDC58Q4VC31 RPL23AP70-201ENST00000483361 460 ntBASIC2.38□□□□□ -2.03
CCDC58Q4VC31 RPS15AP34-201ENST00000487776 387 ntBASIC2.38□□□□□ -2.03
CCDC58Q4VC31 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC2.38□□□□□ -2.03
CCDC58Q4VC31 TMEM108-AS1-201ENST00000504993 705 ntTSL 3 BASIC2.38□□□□□ -2.03
CCDC58Q4VC31 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC2.38□□□□□ -2.03
CCDC58Q4VC31 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC2.38□□□□□ -2.03
CCDC58Q4VC31 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.38□□□□□ -2.03
CCDC58Q4VC31 SNORA31.20-201ENST00000517111 133 ntBASIC2.38□□□□□ -2.03
CCDC58Q4VC31 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
CCDC58Q4VC31 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
CCDC58Q4VC31 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC2.38□□□□□ -2.03
CCDC58Q4VC31 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC2.38□□□□□ -2.03
CCDC58Q4VC31 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
CCDC58Q4VC31 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
CCDC58Q4VC31 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC2.38□□□□□ -2.03
CCDC58Q4VC31 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC2.38□□□□□ -2.03
CCDC58Q4VC31 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC2.38□□□□□ -2.03
CCDC58Q4VC31 AC103810.1-201ENST00000579873 453 ntBASIC2.38□□□□□ -2.03
CCDC58Q4VC31 MIR5092-201ENST00000583139 88 ntBASIC2.38□□□□□ -2.03
CCDC58Q4VC31 VN1R78P-201ENST00000597393 564 ntBASIC2.38□□□□□ -2.03
CCDC58Q4VC31 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC2.38□□□□□ -2.03
CCDC58Q4VC31 RNU6-156P-201ENST00000621869 107 ntBASIC2.38□□□□□ -2.03
CCDC58Q4VC31 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
CCDC58Q4VC31 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
CCDC58Q4VC31 AC109315.1-201ENST00000584143 1347 ntBASIC2.38□□□□□ -2.03
CCDC58Q4VC31 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
CCDC58Q4VC31 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.38□□□□□ -2.03
CCDC58Q4VC31 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
CCDC58Q4VC31 AC007342.9-201ENST00000623877 1385 ntBASIC2.37□□□□□ -2.03
CCDC58Q4VC31 IL33-203ENST00000456383 2501 ntTSL 5 BASIC2.37□□□□□ -2.03
CCDC58Q4VC31 FRG1BP-201ENST00000278882 761 ntBASIC2.37□□□□□ -2.03
CCDC58Q4VC31 DHFRP5-201ENST00000406944 564 ntBASIC2.37□□□□□ -2.03
CCDC58Q4VC31 U3.37-201ENST00000408528 213 ntBASIC2.37□□□□□ -2.03
CCDC58Q4VC31 USP9YP27-201ENST00000418455 438 ntBASIC2.37□□□□□ -2.03
CCDC58Q4VC31 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC2.37□□□□□ -2.03
CCDC58Q4VC31 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC2.37□□□□□ -2.03
CCDC58Q4VC31 AC069157.1-201ENST00000421749 137 ntBASIC2.37□□□□□ -2.03
CCDC58Q4VC31 RPL7P37-201ENST00000425095 738 ntBASIC2.37□□□□□ -2.03
CCDC58Q4VC31 AC112220.1-201ENST00000434628 355 ntBASIC2.37□□□□□ -2.03
CCDC58Q4VC31 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC2.37□□□□□ -2.03
CCDC58Q4VC31 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC2.37□□□□□ -2.03
CCDC58Q4VC31 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC2.37□□□□□ -2.03
CCDC58Q4VC31 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC2.37□□□□□ -2.03
CCDC58Q4VC31 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.37□□□□□ -2.03
CCDC58Q4VC31 RNA5SP310-201ENST00000459084 116 ntBASIC2.37□□□□□ -2.03
CCDC58Q4VC31 RPL30P14-201ENST00000482744 348 ntBASIC2.37□□□□□ -2.03
CCDC58Q4VC31 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC2.37□□□□□ -2.03
CCDC58Q4VC31 AC025768.1-201ENST00000510057 267 ntBASIC2.37□□□□□ -2.03
CCDC58Q4VC31 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
CCDC58Q4VC31 SAP18P1-201ENST00000512058 390 ntBASIC2.37□□□□□ -2.03
CCDC58Q4VC31 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC2.37□□□□□ -2.03
CCDC58Q4VC31 ZDHHC20P3-201ENST00000531576 336 ntBASIC2.37□□□□□ -2.03
CCDC58Q4VC31 OR5BN1P-201ENST00000532955 829 ntBASIC2.37□□□□□ -2.03
CCDC58Q4VC31 LINC02463-201ENST00000546414 497 ntTSL 3 BASIC2.37□□□□□ -2.03
CCDC58Q4VC31 AL645944.1-201ENST00000603857 493 ntBASIC2.37□□□□□ -2.03
CCDC58Q4VC31 AC034102.8-201ENST00000615146 484 ntBASIC2.37□□□□□ -2.03
CCDC58Q4VC31 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
CCDC58Q4VC31 AC018755.4-201ENST00000619715 454 ntBASIC2.37□□□□□ -2.03
CCDC58Q4VC31 AC011460.1-201ENST00000636268 1834 ntBASIC2.37□□□□□ -2.03
CCDC58Q4VC31 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC2.37□□□□□ -2.03
CCDC58Q4VC31 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC2.36□□□□□ -2.03
CCDC58Q4VC31 AC007336.1-201ENST00000576365 3828 ntBASIC2.36□□□□□ -2.03
CCDC58Q4VC31 AL512646.1-201ENST00000269395 1077 ntBASIC2.36□□□□□ -2.03
CCDC58Q4VC31 Z75741.2-201ENST00000417272 1167 ntBASIC2.36□□□□□ -2.03
CCDC58Q4VC31 AC234782.4-201ENST00000417646 1048 ntBASIC2.36□□□□□ -2.03
CCDC58Q4VC31 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC2.36□□□□□ -2.03
CCDC58Q4VC31 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.36□□□□□ -2.03
CCDC58Q4VC31 RPS12P2-201ENST00000439728 269 ntBASIC2.36□□□□□ -2.03
CCDC58Q4VC31 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC2.36□□□□□ -2.03
CCDC58Q4VC31 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC2.36□□□□□ -2.03
CCDC58Q4VC31 snoU13.7-201ENST00000459220 104 ntBASIC2.36□□□□□ -2.03
CCDC58Q4VC31 AC015908.1-201ENST00000478739 476 ntBASIC2.36□□□□□ -2.03
CCDC58Q4VC31 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.36□□□□□ -2.03
CCDC58Q4VC31 MTCO3P44-201ENST00000510977 541 ntBASIC2.36□□□□□ -2.03
CCDC58Q4VC31 SNORA74D-201ENST00000516404 141 ntBASIC2.36□□□□□ -2.03
CCDC58Q4VC31 AC123904.3-201ENST00000547218 814 ntBASIC2.36□□□□□ -2.03
CCDC58Q4VC31 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
CCDC58Q4VC31 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC2.36□□□□□ -2.03
CCDC58Q4VC31 YPEL5P2-201ENST00000605553 359 ntBASIC2.36□□□□□ -2.03
CCDC58Q4VC31 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC2.36□□□□□ -2.03
CCDC58Q4VC31 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC2.36□□□□□ -2.03
CCDC58Q4VC31 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
CCDC58Q4VC31 TAB3P1-202ENST00000452645 1634 ntBASIC2.35□□□□□ -2.03
CCDC58Q4VC31 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
CCDC58Q4VC31 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC2.35□□□□□ -2.03
CCDC58Q4VC31 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.35□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 80.9 ms