Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 Y_RNA.77-201ENST00000362962 107 ntBASIC4.45□□□□□ -1.7
NEK3P51956 RNA5SP513-201ENST00000364648 118 ntBASIC4.45□□□□□ -1.7
NEK3P51956 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC4.45□□□□□ -1.7
NEK3P51956 SNORD116-9-201ENST00000384000 95 ntBASIC4.45□□□□□ -1.7
NEK3P51956 SNORD116-3-201ENST00000384287 95 ntBASIC4.45□□□□□ -1.7
NEK3P51956 SNORD116-7-201ENST00000384404 95 ntBASIC4.45□□□□□ -1.7
NEK3P51956 SNORD116-5-201ENST00000384462 95 ntBASIC4.45□□□□□ -1.7
NEK3P51956 OR6C69P-201ENST00000394268 893 ntBASIC4.45□□□□□ -1.7
NEK3P51956 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC4.45□□□□□ -1.7
NEK3P51956 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC4.45□□□□□ -1.7
NEK3P51956 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC4.45□□□□□ -1.7
NEK3P51956 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC4.45□□□□□ -1.7
NEK3P51956 RPL35AP22-201ENST00000436855 335 ntBASIC4.45□□□□□ -1.7
NEK3P51956 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC4.45□□□□□ -1.7
NEK3P51956 AL451050.1-201ENST00000450126 415 ntBASIC4.45□□□□□ -1.7
NEK3P51956 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC4.45□□□□□ -1.7
NEK3P51956 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC4.45□□□□□ -1.7
NEK3P51956 VN1R17P-201ENST00000472048 1090 ntBASIC4.45□□□□□ -1.7
NEK3P51956 AP000797.1-201ENST00000478870 387 ntBASIC4.45□□□□□ -1.7
NEK3P51956 AC112204.1-201ENST00000502591 103 ntBASIC4.45□□□□□ -1.7
NEK3P51956 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC4.45□□□□□ -1.7
NEK3P51956 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC4.45□□□□□ -1.7
NEK3P51956 KCTD9P2-201ENST00000512203 1013 ntBASIC4.45□□□□□ -1.7
NEK3P51956 AC025881.1-201ENST00000518851 512 ntBASIC4.45□□□□□ -1.7
NEK3P51956 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC4.45□□□□□ -1.7
NEK3P51956 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC4.45□□□□□ -1.7
NEK3P51956 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC4.45□□□□□ -1.7
NEK3P51956 BNIP3P5-201ENST00000562290 498 ntBASIC4.45□□□□□ -1.7
NEK3P51956 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC4.45□□□□□ -1.7
NEK3P51956 AL049634.3-201ENST00000604968 457 ntBASIC4.45□□□□□ -1.7
NEK3P51956 AL031775.1-201ENST00000607014 887 ntBASIC4.45□□□□□ -1.7
NEK3P51956 MIR6716-201ENST00000613413 80 ntBASIC4.45□□□□□ -1.7
NEK3P51956 uc_338.13-201ENST00000618243 179 ntBASIC4.45□□□□□ -1.7
NEK3P51956 MIR6891-201ENST00000618788 93 ntBASIC4.45□□□□□ -1.7
NEK3P51956 ALG13-230ENST00000623189 458 ntTSL 3 BASIC4.45□□□□□ -1.7
NEK3P51956 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC4.45□□□□□ -1.7
NEK3P51956 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
NEK3P51956 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC4.45□□□□□ -1.7
NEK3P51956 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
NEK3P51956 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
NEK3P51956 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC4.44□□□□□ -1.7
NEK3P51956 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
NEK3P51956 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
NEK3P51956 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC4.44□□□□□ -1.7
NEK3P51956 RNU6-114P-201ENST00000384704 105 ntBASIC4.44□□□□□ -1.7
NEK3P51956 MIR3065-201ENST00000390137 79 ntBASIC4.44□□□□□ -1.7
NEK3P51956 SNORD115.1-201ENST00000391109 76 ntBASIC4.44□□□□□ -1.7
NEK3P51956 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
NEK3P51956 AC097374.1-203ENST00000400783 485 ntBASIC4.44□□□□□ -1.7
NEK3P51956 AL136372.1-201ENST00000403060 228 ntBASIC4.44□□□□□ -1.7
NEK3P51956 RNU2-37P-201ENST00000410695 177 ntBASIC4.44□□□□□ -1.7
NEK3P51956 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC4.44□□□□□ -1.7
NEK3P51956 B3GALNT1P1-201ENST00000420569 975 ntBASIC4.44□□□□□ -1.7
NEK3P51956 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC4.44□□□□□ -1.7
NEK3P51956 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC4.44□□□□□ -1.7
NEK3P51956 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC4.44□□□□□ -1.7
NEK3P51956 NANOGP6-201ENST00000429190 847 ntBASIC4.44□□□□□ -1.7
NEK3P51956 AC114495.1-201ENST00000441274 436 ntBASIC4.44□□□□□ -1.7
NEK3P51956 AC118469.1-201ENST00000442943 488 ntBASIC4.44□□□□□ -1.7
NEK3P51956 ABCF2P2-201ENST00000450549 296 ntBASIC4.44□□□□□ -1.7
NEK3P51956 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC4.44□□□□□ -1.7
NEK3P51956 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC4.44□□□□□ -1.7
NEK3P51956 RN7SL812P-201ENST00000493791 279 ntBASIC4.44□□□□□ -1.7
NEK3P51956 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC4.44□□□□□ -1.7
NEK3P51956 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC4.44□□□□□ -1.7
NEK3P51956 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC4.44□□□□□ -1.7
NEK3P51956 AC116347.2-201ENST00000514912 523 ntBASIC4.44□□□□□ -1.7
NEK3P51956 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC4.44□□□□□ -1.7
NEK3P51956 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC4.44□□□□□ -1.7
NEK3P51956 MTND4LP18-201ENST00000526864 291 ntBASIC4.44□□□□□ -1.7
NEK3P51956 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
NEK3P51956 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC4.44□□□□□ -1.7
NEK3P51956 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC4.44□□□□□ -1.7
NEK3P51956 FAM60BP-201ENST00000578364 658 ntBASIC4.44□□□□□ -1.7
NEK3P51956 OR4K8P-201ENST00000578842 1048 ntBASIC4.44□□□□□ -1.7
NEK3P51956 AC060771.1-201ENST00000582031 164 ntBASIC4.44□□□□□ -1.7
NEK3P51956 VN1R79P-201ENST00000593540 513 ntBASIC4.44□□□□□ -1.7
NEK3P51956 AC079587.1-201ENST00000603846 277 ntBASIC4.44□□□□□ -1.7
NEK3P51956 AL022099.1-201ENST00000604551 712 ntBASIC4.44□□□□□ -1.7
NEK3P51956 AL590392.1-201ENST00000604960 446 ntBASIC4.44□□□□□ -1.7
NEK3P51956 AL391497.1-201ENST00000608671 547 ntBASIC4.44□□□□□ -1.7
NEK3P51956 AL355810.1-201ENST00000614629 552 ntBASIC4.44□□□□□ -1.7
NEK3P51956 AC114781.5-201ENST00000615297 108 ntBASIC4.44□□□□□ -1.7
NEK3P51956 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC4.44□□□□□ -1.7
NEK3P51956 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC4.44□□□□□ -1.7
NEK3P51956 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
NEK3P51956 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
NEK3P51956 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
NEK3P51956 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC4.44□□□□□ -1.7
NEK3P51956 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC4.44□□□□□ -1.7
NEK3P51956 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
NEK3P51956 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
NEK3P51956 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC4.43□□□□□ -1.7
NEK3P51956 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.43□□□□□ -1.7
NEK3P51956 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
NEK3P51956 AC011266.1-201ENST00000624119 3569 ntBASIC4.43□□□□□ -1.7
NEK3P51956 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
NEK3P51956 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
NEK3P51956 AC007685.1-201ENST00000329806 452 ntBASIC4.43□□□□□ -1.7
NEK3P51956 MIR331-201ENST00000362302 94 ntBASIC4.43□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 121 ms