Protein–RNA interactions for Protein: P46934

NEDD4, E3 ubiquitin-protein ligase NEDD4, humanhuman

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4P46934 RNU6-115P-201ENST00000364310 107 ntBASIC3.69□□□□□ -1.82
NEDD4P46934 RNU6-1279P-201ENST00000383917 103 ntBASIC3.69□□□□□ -1.82
NEDD4P46934 RNU6-413P-201ENST00000384115 107 ntBASIC3.69□□□□□ -1.82
NEDD4P46934 RNU6-636P-201ENST00000384598 107 ntBASIC3.69□□□□□ -1.82
NEDD4P46934 DSTNP4-201ENST00000399472 474 ntBASIC3.69□□□□□ -1.82
NEDD4P46934 AL583834.1-201ENST00000406943 343 ntBASIC3.69□□□□□ -1.82
NEDD4P46934 HMGB3P23-201ENST00000414981 585 ntBASIC3.69□□□□□ -1.82
NEDD4P46934 AC007435.1-201ENST00000421086 415 ntBASIC3.69□□□□□ -1.82
NEDD4P46934 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC3.69□□□□□ -1.82
NEDD4P46934 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC3.69□□□□□ -1.82
NEDD4P46934 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC3.69□□□□□ -1.82
NEDD4P46934 AC127537.2-201ENST00000439258 465 ntBASIC3.69□□□□□ -1.82
NEDD4P46934 AC092393.1-201ENST00000439625 742 ntBASIC3.69□□□□□ -1.82
NEDD4P46934 AC016696.1-201ENST00000446949 318 ntBASIC3.69□□□□□ -1.82
NEDD4P46934 AC007327.1-201ENST00000447461 264 ntBASIC3.69□□□□□ -1.82
NEDD4P46934 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC3.69□□□□□ -1.82
NEDD4P46934 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC3.69□□□□□ -1.82
NEDD4P46934 AC005410.1-202ENST00000460347 485 ntBASIC3.69□□□□□ -1.82
NEDD4P46934 RPS27P29-201ENST00000463110 252 ntBASIC3.69□□□□□ -1.82
NEDD4P46934 AC011037.1-201ENST00000483964 558 ntBASIC3.69□□□□□ -1.82
NEDD4P46934 RAD51AP1P1-201ENST00000484195 1001 ntBASIC3.69□□□□□ -1.82
NEDD4P46934 AC092045.1-201ENST00000495716 1231 ntBASIC3.69□□□□□ -1.82
NEDD4P46934 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC3.69□□□□□ -1.82
NEDD4P46934 OR5H4P-201ENST00000510851 923 ntBASIC3.69□□□□□ -1.82
NEDD4P46934 USP9YP5-201ENST00000511770 630 ntBASIC3.69□□□□□ -1.82
NEDD4P46934 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC3.69□□□□□ -1.82
NEDD4P46934 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC3.69□□□□□ -1.82
NEDD4P46934 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC3.69□□□□□ -1.82
NEDD4P46934 PDCL2P2-201ENST00000533651 189 ntBASIC3.69□□□□□ -1.82
NEDD4P46934 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC3.69□□□□□ -1.82
NEDD4P46934 LYZ-203ENST00000549690 669 ntTSL 2 BASIC3.69□□□□□ -1.82
NEDD4P46934 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC3.69□□□□□ -1.82
NEDD4P46934 AC093519.1-201ENST00000566109 298 ntBASIC3.69□□□□□ -1.82
NEDD4P46934 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.69□□□□□ -1.82
NEDD4P46934 AC015688.2-201ENST00000584523 262 ntBASIC3.69□□□□□ -1.82
NEDD4P46934 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.69□□□□□ -1.82
NEDD4P46934 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC3.69□□□□□ -1.82
NEDD4P46934 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC3.69□□□□□ -1.82
NEDD4P46934 AC063944.3-201ENST00000609969 533 ntBASIC3.69□□□□□ -1.82
NEDD4P46934 AC024257.5-201ENST00000612739 531 ntBASIC3.69□□□□□ -1.82
NEDD4P46934 MTND5P24-201ENST00000438892 1767 ntBASIC3.68□□□□□ -1.82
NEDD4P46934 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
NEDD4P46934 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
NEDD4P46934 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
NEDD4P46934 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.68□□□□□ -1.82
NEDD4P46934 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
NEDD4P46934 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
NEDD4P46934 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
NEDD4P46934 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC3.68□□□□□ -1.82
NEDD4P46934 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
NEDD4P46934 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC3.68□□□□□ -1.82
NEDD4P46934 MTND5P28-201ENST00000438005 1594 ntBASIC3.68□□□□□ -1.82
NEDD4P46934 PCF11-AS1-201ENST00000602322 1516 ntBASIC3.68□□□□□ -1.82
NEDD4P46934 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC3.68□□□□□ -1.82
NEDD4P46934 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
NEDD4P46934 MIR148B-201ENST00000362252 99 ntBASIC3.68□□□□□ -1.82
NEDD4P46934 U3.6-201ENST00000363622 211 ntBASIC3.68□□□□□ -1.82
NEDD4P46934 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC3.68□□□□□ -1.82
NEDD4P46934 SNORD65.1-201ENST00000390889 71 ntBASIC3.68□□□□□ -1.82
NEDD4P46934 RNU6-1300P-201ENST00000391046 108 ntBASIC3.68□□□□□ -1.82
NEDD4P46934 MTCO3P31-201ENST00000405526 789 ntBASIC3.68□□□□□ -1.82
NEDD4P46934 ERMN-204ENST00000409925 556 ntTSL 4 BASIC3.68□□□□□ -1.82
NEDD4P46934 AC007899.1-201ENST00000412776 775 ntBASIC3.68□□□□□ -1.82
NEDD4P46934 UBE2Q2P12-201ENST00000414573 204 ntBASIC3.68□□□□□ -1.82
NEDD4P46934 AC245291.1-201ENST00000419501 328 ntBASIC3.68□□□□□ -1.82
NEDD4P46934 RPS15AP6-201ENST00000420703 385 ntBASIC3.68□□□□□ -1.82
NEDD4P46934 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC3.68□□□□□ -1.82
NEDD4P46934 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC3.68□□□□□ -1.82
NEDD4P46934 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC3.68□□□□□ -1.82
NEDD4P46934 SEPT7P5-201ENST00000434048 306 ntBASIC3.68□□□□□ -1.82
NEDD4P46934 RPL23AP83-201ENST00000434984 473 ntBASIC3.68□□□□□ -1.82
NEDD4P46934 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC3.68□□□□□ -1.82
NEDD4P46934 AC241584.1-201ENST00000438469 1241 ntBASIC3.68□□□□□ -1.82
NEDD4P46934 CR769776.1-201ENST00000441254 787 ntBASIC3.68□□□□□ -1.82
NEDD4P46934 RPS12P18-201ENST00000442381 270 ntBASIC3.68□□□□□ -1.82
NEDD4P46934 AL671855.1-201ENST00000446875 1203 ntBASIC3.68□□□□□ -1.82
NEDD4P46934 AL034418.1-201ENST00000448675 860 ntBASIC3.68□□□□□ -1.82
NEDD4P46934 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC3.68□□□□□ -1.82
NEDD4P46934 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC3.68□□□□□ -1.82
NEDD4P46934 NF1P3-201ENST00000457709 450 ntBASIC3.68□□□□□ -1.82
NEDD4P46934 AC114967.1-201ENST00000504890 259 ntBASIC3.68□□□□□ -1.82
NEDD4P46934 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC3.68□□□□□ -1.82
NEDD4P46934 RN7SKP265-201ENST00000516448 223 ntBASIC3.68□□□□□ -1.82
NEDD4P46934 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC3.68□□□□□ -1.82
NEDD4P46934 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC3.68□□□□□ -1.82
NEDD4P46934 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC3.68□□□□□ -1.82
NEDD4P46934 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC3.68□□□□□ -1.82
NEDD4P46934 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC3.68□□□□□ -1.82
NEDD4P46934 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
NEDD4P46934 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC3.68□□□□□ -1.82
NEDD4P46934 AC037471.2-201ENST00000564941 598 ntBASIC3.68□□□□□ -1.82
NEDD4P46934 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.68□□□□□ -1.82
NEDD4P46934 AC074051.3-201ENST00000570238 358 ntBASIC3.68□□□□□ -1.82
NEDD4P46934 MIR3186-201ENST00000577404 85 ntBASIC3.68□□□□□ -1.82
NEDD4P46934 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC3.68□□□□□ -1.82
NEDD4P46934 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.68□□□□□ -1.82
NEDD4P46934 AL390838.2-201ENST00000602394 274 ntBASIC3.68□□□□□ -1.82
NEDD4P46934 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC3.68□□□□□ -1.82
NEDD4P46934 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC3.68□□□□□ -1.82
NEDD4P46934 AP006248.2-201ENST00000623309 592 ntBASIC3.68□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 98.4 ms