Protein–RNA interactions for Protein: P17096

HMGA1, High mobility group protein HMG-I/HMG-Y, humanhuman

Known RBP Predictions only

Length 107 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P17096 MIR591-201ENST00000385290 95 ntBASIC2.28□□□□□ -2.04
HMGA1P17096 SNORA26.7-201ENST00000391288 122 ntBASIC2.28□□□□□ -2.04
HMGA1P17096 SNORA11.4-201ENST00000408823 129 ntBASIC2.28□□□□□ -2.04
HMGA1P17096 AC073310.1-201ENST00000423226 1033 ntBASIC2.28□□□□□ -2.04
HMGA1P17096 AL590103.1-201ENST00000434488 307 ntBASIC2.28□□□□□ -2.04
HMGA1P17096 SETP8-201ENST00000435341 628 ntBASIC2.28□□□□□ -2.04
HMGA1P17096 UBL5P3-201ENST00000475112 231 ntBASIC2.28□□□□□ -2.04
HMGA1P17096 AC092451.1-201ENST00000480211 153 ntBASIC2.28□□□□□ -2.04
HMGA1P17096 TPMTP1-201ENST00000592307 737 ntBASIC2.28□□□□□ -2.04
HMGA1P17096 NTAN1P1-201ENST00000603150 646 ntBASIC2.28□□□□□ -2.04
HMGA1P17096 AC098826.3-201ENST00000603823 466 ntBASIC2.28□□□□□ -2.04
HMGA1P17096 AC104763.2-201ENST00000604179 382 ntBASIC2.28□□□□□ -2.04
HMGA1P17096 MIR219B-201ENST00000637023 88 ntBASIC2.28□□□□□ -2.04
HMGA1P17096 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
HMGA1P17096 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC2.28□□□□□ -2.04
HMGA1P17096 AC007256.1-201ENST00000392253 2765 ntBASIC2.27□□□□□ -2.05
HMGA1P17096 AC117529.2-201ENST00000512159 2068 ntBASIC2.27□□□□□ -2.05
HMGA1P17096 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
HMGA1P17096 MIR504-201ENST00000385065 83 ntBASIC2.27□□□□□ -2.05
HMGA1P17096 MIR1289-2-201ENST00000408360 111 ntBASIC2.27□□□□□ -2.05
HMGA1P17096 AL137014.1-201ENST00000420490 1226 ntBASIC2.27□□□□□ -2.05
HMGA1P17096 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC2.27□□□□□ -2.05
HMGA1P17096 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC2.27□□□□□ -2.05
HMGA1P17096 FDX1P2-201ENST00000450769 375 ntBASIC2.27□□□□□ -2.05
HMGA1P17096 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC2.27□□□□□ -2.05
HMGA1P17096 AC091179.1-201ENST00000461606 579 ntBASIC2.27□□□□□ -2.05
HMGA1P17096 AC087190.1-201ENST00000484462 480 ntBASIC2.27□□□□□ -2.05
HMGA1P17096 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC2.27□□□□□ -2.05
HMGA1P17096 AC090071.1-201ENST00000507713 644 ntBASIC2.27□□□□□ -2.05
HMGA1P17096 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
HMGA1P17096 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
HMGA1P17096 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC2.27□□□□□ -2.05
HMGA1P17096 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC2.27□□□□□ -2.05
HMGA1P17096 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
HMGA1P17096 RANP3-201ENST00000530970 276 ntBASIC2.27□□□□□ -2.05
HMGA1P17096 AC005951.1-201ENST00000576706 485 ntBASIC2.27□□□□□ -2.05
HMGA1P17096 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC2.27□□□□□ -2.05
HMGA1P17096 MIR7843-201ENST00000622274 79 ntBASIC2.27□□□□□ -2.05
HMGA1P17096 AC093591.3-201ENST00000634516 308 ntBASIC2.27□□□□□ -2.05
HMGA1P17096 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC2.27□□□□□ -2.05
HMGA1P17096 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.27□□□□□ -2.05
HMGA1P17096 AC092881.1-201ENST00000638218 2733 ntBASIC2.27□□□□□ -2.05
HMGA1P17096 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC2.27□□□□□ -2.05
HMGA1P17096 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
HMGA1P17096 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
HMGA1P17096 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC2.26□□□□□ -2.05
HMGA1P17096 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
HMGA1P17096 U8.9-201ENST00000365667 134 ntBASIC2.26□□□□□ -2.05
HMGA1P17096 RPS3AP26-201ENST00000398259 784 ntBASIC2.26□□□□□ -2.05
HMGA1P17096 HMGN2P3-201ENST00000433603 273 ntBASIC2.26□□□□□ -2.05
HMGA1P17096 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC2.26□□□□□ -2.05
HMGA1P17096 HMGN2P5-201ENST00000436882 273 ntBASIC2.26□□□□□ -2.05
HMGA1P17096 TRIM60P18-201ENST00000441518 828 ntBASIC2.26□□□□□ -2.05
HMGA1P17096 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC2.26□□□□□ -2.05
HMGA1P17096 SNORD116-26-201ENST00000516006 96 ntBASIC2.26□□□□□ -2.05
HMGA1P17096 HSPE1P18-201ENST00000517602 280 ntBASIC2.26□□□□□ -2.05
HMGA1P17096 AC078814.3-201ENST00000553036 491 ntBASIC2.26□□□□□ -2.05
HMGA1P17096 AL161752.1-201ENST00000557721 263 ntTSL 2 BASIC2.26□□□□□ -2.05
HMGA1P17096 ZNF192P1-203ENST00000565888 810 ntBASIC2.26□□□□□ -2.05
HMGA1P17096 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC2.26□□□□□ -2.05
HMGA1P17096 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.26□□□□□ -2.05
HMGA1P17096 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
HMGA1P17096 XKRY2-202ENST00000623874 1581 ntBASIC2.26□□□□□ -2.05
HMGA1P17096 XKRY-202ENST00000624960 1581 ntBASIC2.26□□□□□ -2.05
HMGA1P17096 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC2.26□□□□□ -2.05
HMGA1P17096 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.26□□□□□ -2.05
HMGA1P17096 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.26□□□□□ -2.05
HMGA1P17096 GABPAP-201ENST00000419271 1356 ntBASIC2.25□□□□□ -2.05
HMGA1P17096 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC2.25□□□□□ -2.05
HMGA1P17096 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.25□□□□□ -2.05
HMGA1P17096 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
HMGA1P17096 RNA5SP167-201ENST00000365461 116 ntBASIC2.25□□□□□ -2.05
HMGA1P17096 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC2.25□□□□□ -2.05
HMGA1P17096 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC2.25□□□□□ -2.05
HMGA1P17096 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.25□□□□□ -2.05
HMGA1P17096 DPPA2P1-201ENST00000428060 556 ntBASIC2.25□□□□□ -2.05
HMGA1P17096 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.25□□□□□ -2.05
HMGA1P17096 AC010881.1-201ENST00000433830 235 ntBASIC2.25□□□□□ -2.05
HMGA1P17096 CR769767.1-201ENST00000436337 346 ntBASIC2.25□□□□□ -2.05
HMGA1P17096 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC2.25□□□□□ -2.05
HMGA1P17096 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC2.25□□□□□ -2.05
HMGA1P17096 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC2.25□□□□□ -2.05
HMGA1P17096 AL118520.1-201ENST00000450770 291 ntBASIC2.25□□□□□ -2.05
HMGA1P17096 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC2.25□□□□□ -2.05
HMGA1P17096 AC138956.1-201ENST00000508187 504 ntTSL 3 BASIC2.25□□□□□ -2.05
HMGA1P17096 MTND4LP22-201ENST00000508209 276 ntBASIC2.25□□□□□ -2.05
HMGA1P17096 AC107222.1-201ENST00000510899 637 ntBASIC2.25□□□□□ -2.05
HMGA1P17096 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC2.25□□□□□ -2.05
HMGA1P17096 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
HMGA1P17096 AP000889.2-201ENST00000532684 490 ntBASIC2.25□□□□□ -2.05
HMGA1P17096 AC010198.2-201ENST00000550612 259 ntBASIC2.25□□□□□ -2.05
HMGA1P17096 AC073387.2-201ENST00000604797 784 ntBASIC2.25□□□□□ -2.05
HMGA1P17096 AC131902.3-201ENST00000611767 581 ntBASIC2.25□□□□□ -2.05
HMGA1P17096 AC004696.1-201ENST00000614345 607 ntBASIC2.25□□□□□ -2.05
HMGA1P17096 AC010378.1-201ENST00000619270 362 ntBASIC2.25□□□□□ -2.05
HMGA1P17096 MIR6132-201ENST00000622083 109 ntBASIC2.25□□□□□ -2.05
HMGA1P17096 AL359757.2-201ENST00000624309 274 ntBASIC2.25□□□□□ -2.05
HMGA1P17096 CFTRP2-201ENST00000634304 199 ntBASIC2.25□□□□□ -2.05
HMGA1P17096 AC010329.2-201ENST00000595195 2737 ntBASIC2.25□□□□□ -2.05
HMGA1P17096 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC2.24□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 93.3 ms