Protein–RNA interactions for Protein: P03905

MT-ND4, NADH-ubiquinone oxidoreductase chain 4, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND4P03905 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC2.66□□□□□ -1.98
MT-ND4P03905 AL161431.1-201ENST00000618966 4205 ntBASIC2.66□□□□□ -1.98
MT-ND4P03905 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC2.66□□□□□ -1.98
MT-ND4P03905 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
MT-ND4P03905 RNU1-33P-201ENST00000364249 162 ntBASIC2.66□□□□□ -1.98
MT-ND4P03905 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
MT-ND4P03905 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC2.66□□□□□ -1.98
MT-ND4P03905 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC2.66□□□□□ -1.98
MT-ND4P03905 RNU6-354P-201ENST00000383862 107 ntBASIC2.66□□□□□ -1.98
MT-ND4P03905 RNU6-610P-201ENST00000384264 107 ntBASIC2.66□□□□□ -1.98
MT-ND4P03905 RPL22P22-201ENST00000395439 379 ntBASIC2.66□□□□□ -1.98
MT-ND4P03905 RPL31P1-201ENST00000398116 372 ntBASIC2.66□□□□□ -1.98
MT-ND4P03905 TAF13P2-201ENST00000416876 286 ntBASIC2.66□□□□□ -1.98
MT-ND4P03905 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC2.66□□□□□ -1.98
MT-ND4P03905 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC2.66□□□□□ -1.98
MT-ND4P03905 USP9YP36-201ENST00000424581 829 ntBASIC2.66□□□□□ -1.98
MT-ND4P03905 KCTD10P1-201ENST00000434203 625 ntBASIC2.66□□□□□ -1.98
MT-ND4P03905 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC2.66□□□□□ -1.98
MT-ND4P03905 AC005019.1-201ENST00000436455 431 ntBASIC2.66□□□□□ -1.98
MT-ND4P03905 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC2.66□□□□□ -1.98
MT-ND4P03905 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC2.66□□□□□ -1.98
MT-ND4P03905 AL050341.1-201ENST00000447743 313 ntBASIC2.66□□□□□ -1.98
MT-ND4P03905 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC2.66□□□□□ -1.98
MT-ND4P03905 RN7SL633P-201ENST00000488974 297 ntBASIC2.66□□□□□ -1.98
MT-ND4P03905 RPL7P23-201ENST00000493874 747 ntBASIC2.66□□□□□ -1.98
MT-ND4P03905 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC2.66□□□□□ -1.98
MT-ND4P03905 ACTR3BP4-201ENST00000503033 1244 ntBASIC2.66□□□□□ -1.98
MT-ND4P03905 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
MT-ND4P03905 SAP18P1-201ENST00000512058 390 ntBASIC2.66□□□□□ -1.98
MT-ND4P03905 SNORA31.20-201ENST00000517111 133 ntBASIC2.66□□□□□ -1.98
MT-ND4P03905 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC2.66□□□□□ -1.98
MT-ND4P03905 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC2.66□□□□□ -1.98
MT-ND4P03905 AP003385.6-201ENST00000531603 374 ntBASIC2.66□□□□□ -1.98
MT-ND4P03905 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC2.66□□□□□ -1.98
MT-ND4P03905 AC011611.1-201ENST00000552179 197 ntBASIC2.66□□□□□ -1.98
MT-ND4P03905 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC2.66□□□□□ -1.98
MT-ND4P03905 AC034105.4-201ENST00000568304 277 ntBASIC2.66□□□□□ -1.98
MT-ND4P03905 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC2.66□□□□□ -1.98
MT-ND4P03905 AL513477.2-201ENST00000607858 568 ntBASIC2.66□□□□□ -1.98
MT-ND4P03905 uc_338.25-201ENST00000613756 156 ntBASIC2.66□□□□□ -1.98
MT-ND4P03905 AC009464.1-201ENST00000615731 469 ntBASIC2.66□□□□□ -1.98
MT-ND4P03905 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC2.66□□□□□ -1.98
MT-ND4P03905 AC073348.1-201ENST00000623002 331 ntBASIC2.66□□□□□ -1.98
MT-ND4P03905 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC2.66□□□□□ -1.98
MT-ND4P03905 TEX41-300ENST00000631048 69 ntTSL 5 BASIC2.66□□□□□ -1.98
MT-ND4P03905 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
MT-ND4P03905 POMP-202ENST00000460403 1428 ntTSL 3 BASIC2.66□□□□□ -1.98
MT-ND4P03905 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
MT-ND4P03905 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
MT-ND4P03905 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC2.65□□□□□ -1.98
MT-ND4P03905 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC2.65□□□□□ -1.98
MT-ND4P03905 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC2.65□□□□□ -1.98
MT-ND4P03905 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC2.65□□□□□ -1.99
MT-ND4P03905 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC2.65□□□□□ -1.99
MT-ND4P03905 Y_RNA.126-201ENST00000363382 111 ntBASIC2.65□□□□□ -1.99
MT-ND4P03905 SNORA14A-201ENST00000364773 135 ntBASIC2.65□□□□□ -1.99
MT-ND4P03905 CD24P4-201ENST00000382840 243 ntBASIC2.65□□□□□ -1.99
MT-ND4P03905 U6.112-201ENST00000384129 70 ntBASIC2.65□□□□□ -1.99
MT-ND4P03905 MIR134-201ENST00000385258 73 ntBASIC2.65□□□□□ -1.99
MT-ND4P03905 RNU6-837P-201ENST00000391056 108 ntBASIC2.65□□□□□ -1.99
MT-ND4P03905 AC110754.1-201ENST00000399740 601 ntBASIC2.65□□□□□ -1.99
MT-ND4P03905 GSTA8P-201ENST00000404253 637 ntBASIC2.65□□□□□ -1.99
MT-ND4P03905 RNA5SP274-201ENST00000410484 108 ntBASIC2.65□□□□□ -1.99
MT-ND4P03905 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC2.65□□□□□ -1.99
MT-ND4P03905 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC2.65□□□□□ -1.99
MT-ND4P03905 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC2.65□□□□□ -1.99
MT-ND4P03905 FNDC3CP-201ENST00000420795 1155 ntBASIC2.65□□□□□ -1.99
MT-ND4P03905 MTATP6P4-201ENST00000427725 675 ntBASIC2.65□□□□□ -1.99
MT-ND4P03905 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC2.65□□□□□ -1.99
MT-ND4P03905 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC2.65□□□□□ -1.99
MT-ND4P03905 AL096829.2-201ENST00000446582 742 ntBASIC2.65□□□□□ -1.99
MT-ND4P03905 AC017099.1-201ENST00000448261 1028 ntBASIC2.65□□□□□ -1.99
MT-ND4P03905 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC2.65□□□□□ -1.99
MT-ND4P03905 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC2.65□□□□□ -1.99
MT-ND4P03905 CYCSP35-201ENST00000451978 304 ntBASIC2.65□□□□□ -1.99
MT-ND4P03905 CCNB1IP1P3-201ENST00000454702 829 ntBASIC2.65□□□□□ -1.99
MT-ND4P03905 AL590639.1-201ENST00000456484 337 ntBASIC2.65□□□□□ -1.99
MT-ND4P03905 RPL21P10-201ENST00000463521 490 ntBASIC2.65□□□□□ -1.99
MT-ND4P03905 XACT-201ENST00000468762 497 ntTSL 5 BASIC2.65□□□□□ -1.99
MT-ND4P03905 RPS23P3-201ENST00000470993 430 ntBASIC2.65□□□□□ -1.99
MT-ND4P03905 AC020898.1-201ENST00000474167 787 ntBASIC2.65□□□□□ -1.99
MT-ND4P03905 RN7SL293P-201ENST00000481765 281 ntBASIC2.65□□□□□ -1.99
MT-ND4P03905 RN7SL20P-201ENST00000488827 297 ntBASIC2.65□□□□□ -1.99
MT-ND4P03905 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC2.65□□□□□ -1.99
MT-ND4P03905 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC2.65□□□□□ -1.99
MT-ND4P03905 AC007536.1-201ENST00000533382 349 ntBASIC2.65□□□□□ -1.99
MT-ND4P03905 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC2.65□□□□□ -1.99
MT-ND4P03905 NCAPGP2-201ENST00000557911 754 ntBASIC2.65□□□□□ -1.99
MT-ND4P03905 RPL21P12-201ENST00000559810 515 ntBASIC2.65□□□□□ -1.99
MT-ND4P03905 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC2.65□□□□□ -1.99
MT-ND4P03905 AL157394.1-201ENST00000562983 1224 ntBASIC2.65□□□□□ -1.99
MT-ND4P03905 ZNF415P1-201ENST00000582279 1166 ntBASIC2.65□□□□□ -1.99
MT-ND4P03905 AL020997.2-201ENST00000602607 184 ntBASIC2.65□□□□□ -1.99
MT-ND4P03905 AC096947.1-201ENST00000603233 470 ntBASIC2.65□□□□□ -1.99
MT-ND4P03905 AP005229.2-201ENST00000609980 697 ntBASIC2.65□□□□□ -1.99
MT-ND4P03905 AC131902.3-201ENST00000611767 581 ntBASIC2.65□□□□□ -1.99
MT-ND4P03905 AC107871.2-201ENST00000612894 502 ntBASIC2.65□□□□□ -1.99
MT-ND4P03905 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
MT-ND4P03905 AC006111.3-201ENST00000622137 383 ntBASIC2.65□□□□□ -1.99
MT-ND4P03905 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC2.65□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms