Protein–RNA interactions for Protein: P01130

LDLR, Low-density lipoprotein receptor, humanhuman

Predictions only

Length 860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRP01130 AC010608.2-201ENST00000624830 470 ntBASIC3.85□□□□□ -1.79
LDLRP01130 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC3.85□□□□□ -1.79
LDLRP01130 AC006927.3-201ENST00000638789 384 ntBASIC3.85□□□□□ -1.79
LDLRP01130 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC3.85□□□□□ -1.79
LDLRP01130 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
LDLRP01130 OR5BR1P-201ENST00000524992 1330 ntBASIC3.85□□□□□ -1.79
LDLRP01130 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
LDLRP01130 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
LDLRP01130 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
LDLRP01130 AL390237.1-201ENST00000404226 1415 ntBASIC3.85□□□□□ -1.79
LDLRP01130 AC092104.1-201ENST00000497346 1441 ntBASIC3.85□□□□□ -1.79
LDLRP01130 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
LDLRP01130 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC3.85□□□□□ -1.79
LDLRP01130 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
LDLRP01130 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC3.84□□□□□ -1.79
LDLRP01130 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC3.84□□□□□ -1.79
LDLRP01130 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
LDLRP01130 LINC00561-201ENST00000565815 2738 ntBASIC3.84□□□□□ -1.79
LDLRP01130 EXOC5P1-201ENST00000510543 1969 ntBASIC3.84□□□□□ -1.79
LDLRP01130 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC3.84□□□□□ -1.79
LDLRP01130 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC3.84□□□□□ -1.79
LDLRP01130 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
LDLRP01130 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
LDLRP01130 RNA5SP167-201ENST00000365461 116 ntBASIC3.84□□□□□ -1.79
LDLRP01130 RNU5A-2P-201ENST00000384337 116 ntBASIC3.84□□□□□ -1.79
LDLRP01130 MIR506-201ENST00000384998 124 ntBASIC3.84□□□□□ -1.79
LDLRP01130 HMGN2P8-201ENST00000391458 268 ntBASIC3.84□□□□□ -1.79
LDLRP01130 RPS3AP26-201ENST00000398259 784 ntBASIC3.84□□□□□ -1.79
LDLRP01130 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC3.84□□□□□ -1.79
LDLRP01130 AL133384.1-201ENST00000412744 351 ntBASIC3.84□□□□□ -1.79
LDLRP01130 AMD1P2-201ENST00000412936 992 ntBASIC3.84□□□□□ -1.79
LDLRP01130 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC3.84□□□□□ -1.79
LDLRP01130 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC3.84□□□□□ -1.79
LDLRP01130 TRBV24OR9-2-201ENST00000416632 435 ntBASIC3.84□□□□□ -1.79
LDLRP01130 OFD1P11Y-201ENST00000418213 1177 ntBASIC3.84□□□□□ -1.79
LDLRP01130 AL157831.1-201ENST00000426134 473 ntBASIC3.84□□□□□ -1.79
LDLRP01130 AL593851.1-201ENST00000426171 157 ntBASIC3.84□□□□□ -1.79
LDLRP01130 OR51AB1P-201ENST00000429046 620 ntBASIC3.84□□□□□ -1.79
LDLRP01130 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC3.84□□□□□ -1.79
LDLRP01130 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC3.84□□□□□ -1.79
LDLRP01130 RPL18AP17-201ENST00000455326 198 ntBASIC3.84□□□□□ -1.79
LDLRP01130 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC3.84□□□□□ -1.79
LDLRP01130 RN7SL93P-201ENST00000463035 293 ntBASIC3.84□□□□□ -1.79
LDLRP01130 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC3.84□□□□□ -1.79
LDLRP01130 RPL21P103-201ENST00000479921 488 ntBASIC3.84□□□□□ -1.79
LDLRP01130 KLRA1P-201ENST00000503499 986 ntBASIC3.84□□□□□ -1.79
LDLRP01130 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC3.84□□□□□ -1.79
LDLRP01130 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
LDLRP01130 KCTD9P2-201ENST00000512203 1013 ntBASIC3.84□□□□□ -1.79
LDLRP01130 AC099522.1-202ENST00000514718 367 ntBASIC3.84□□□□□ -1.79
LDLRP01130 RNU6-759P-201ENST00000516740 103 ntBASIC3.84□□□□□ -1.79
LDLRP01130 RNA5SP73-201ENST00000516744 108 ntBASIC3.84□□□□□ -1.79
LDLRP01130 TRMT10BP1-201ENST00000519377 943 ntBASIC3.84□□□□□ -1.79
LDLRP01130 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC3.84□□□□□ -1.79
LDLRP01130 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC3.84□□□□□ -1.79
LDLRP01130 OR4A12P-201ENST00000530847 918 ntBASIC3.84□□□□□ -1.79
LDLRP01130 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
LDLRP01130 AC092851.1-201ENST00000535964 478 ntBASIC3.84□□□□□ -1.79
LDLRP01130 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC3.84□□□□□ -1.79
LDLRP01130 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC3.84□□□□□ -1.79
LDLRP01130 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC3.84□□□□□ -1.79
LDLRP01130 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC3.84□□□□□ -1.79
LDLRP01130 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC3.84□□□□□ -1.79
LDLRP01130 RPL23AP87-202ENST00000573039 466 ntBASIC3.84□□□□□ -1.79
LDLRP01130 MIR5685-201ENST00000579080 79 ntBASIC3.84□□□□□ -1.79
LDLRP01130 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC3.84□□□□□ -1.79
LDLRP01130 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC3.84□□□□□ -1.79
LDLRP01130 AC069304.2-201ENST00000605154 435 ntBASIC3.84□□□□□ -1.79
LDLRP01130 AL160281.1-201ENST00000605307 311 ntBASIC3.84□□□□□ -1.79
LDLRP01130 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.84□□□□□ -1.79
LDLRP01130 AC072039.2-201ENST00000608883 439 ntBASIC3.84□□□□□ -1.79
LDLRP01130 FAM27D1-201ENST00000612308 341 ntBASIC3.84□□□□□ -1.79
LDLRP01130 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC3.84□□□□□ -1.79
LDLRP01130 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
LDLRP01130 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC3.84□□□□□ -1.79
LDLRP01130 AC138649.5-201ENST00000637456 137 ntBASIC3.84□□□□□ -1.79
LDLRP01130 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC3.84□□□□□ -1.79
LDLRP01130 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
LDLRP01130 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC3.84□□□□□ -1.8
LDLRP01130 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC3.84□□□□□ -1.8
LDLRP01130 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC3.84□□□□□ -1.8
LDLRP01130 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC3.83□□□□□ -1.8
LDLRP01130 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.83□□□□□ -1.8
LDLRP01130 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.83□□□□□ -1.8
LDLRP01130 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
LDLRP01130 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
LDLRP01130 RNA5SP119-201ENST00000362715 117 ntBASIC3.83□□□□□ -1.8
LDLRP01130 Y_RNA.77-201ENST00000362962 107 ntBASIC3.83□□□□□ -1.8
LDLRP01130 RNU1-18P-201ENST00000363062 164 ntBASIC3.83□□□□□ -1.8
LDLRP01130 SNORA4.1-201ENST00000364263 144 ntBASIC3.83□□□□□ -1.8
LDLRP01130 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
LDLRP01130 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC3.83□□□□□ -1.8
LDLRP01130 RNU6-1200P-201ENST00000384162 107 ntBASIC3.83□□□□□ -1.8
LDLRP01130 MIR153-1-201ENST00000384914 90 ntBASIC3.83□□□□□ -1.8
LDLRP01130 ATP5F1P4-201ENST00000397288 746 ntBASIC3.83□□□□□ -1.8
LDLRP01130 AL583835.1-201ENST00000399570 407 ntBASIC3.83□□□□□ -1.8
LDLRP01130 AL590084.2-201ENST00000401481 382 ntBASIC3.83□□□□□ -1.8
LDLRP01130 AL355379.1-201ENST00000405542 640 ntBASIC3.83□□□□□ -1.8
LDLRP01130 MIR1284-201ENST00000408337 120 ntBASIC3.83□□□□□ -1.8
LDLRP01130 Y_RNA.604-201ENST00000410574 102 ntBASIC3.83□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms