Protein–RNA interactions for Protein: O95343

SIX3, Homeobox protein SIX3, humanhuman

Predicted RBP Predictions only

Length 332 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX3O95343 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC3.64□□□□□ -1.83
SIX3O95343 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.64□□□□□ -1.83
SIX3O95343 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
SIX3O95343 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
SIX3O95343 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC3.63□□□□□ -1.83
SIX3O95343 AC097714.1-201ENST00000511272 1647 ntBASIC3.63□□□□□ -1.83
SIX3O95343 OR4G11P-202ENST00000642116 1414 ntBASIC3.63□□□□□ -1.83
SIX3O95343 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
SIX3O95343 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
SIX3O95343 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC3.63□□□□□ -1.83
SIX3O95343 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
SIX3O95343 RNU6-28P-201ENST00000362378 107 ntBASIC3.63□□□□□ -1.83
SIX3O95343 RNA5SP432-201ENST00000362480 116 ntBASIC3.63□□□□□ -1.83
SIX3O95343 RNA5SP424-201ENST00000390988 115 ntBASIC3.63□□□□□ -1.83
SIX3O95343 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
SIX3O95343 AC093578.1-201ENST00000415219 368 ntBASIC3.63□□□□□ -1.83
SIX3O95343 LINC01752-201ENST00000417299 438 ntTSL 2 BASIC3.63□□□□□ -1.83
SIX3O95343 HMGB3P20-201ENST00000417997 600 ntBASIC3.63□□□□□ -1.83
SIX3O95343 AC079780.1-201ENST00000428259 207 ntBASIC3.63□□□□□ -1.83
SIX3O95343 HMGB3P5-201ENST00000428894 612 ntBASIC3.63□□□□□ -1.83
SIX3O95343 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
SIX3O95343 RPL21P89-201ENST00000444021 467 ntBASIC3.63□□□□□ -1.83
SIX3O95343 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC3.63□□□□□ -1.83
SIX3O95343 EXTL2P1-201ENST00000446218 416 ntBASIC3.63□□□□□ -1.83
SIX3O95343 AL133547.1-201ENST00000448546 220 ntBASIC3.63□□□□□ -1.83
SIX3O95343 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC3.63□□□□□ -1.83
SIX3O95343 AC006480.1-201ENST00000449887 378 ntBASIC3.63□□□□□ -1.83
SIX3O95343 RPL26P28-201ENST00000451325 435 ntBASIC3.63□□□□□ -1.83
SIX3O95343 UBDP1-202ENST00000457888 382 ntBASIC3.63□□□□□ -1.83
SIX3O95343 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.63□□□□□ -1.83
SIX3O95343 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC3.63□□□□□ -1.83
SIX3O95343 AC110768.1-201ENST00000509222 400 ntBASIC3.63□□□□□ -1.83
SIX3O95343 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC3.63□□□□□ -1.83
SIX3O95343 AC079395.1-201ENST00000510981 262 ntBASIC3.63□□□□□ -1.83
SIX3O95343 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC3.63□□□□□ -1.83
SIX3O95343 IGKV2D-23-201ENST00000518179 286 ntBASIC3.63□□□□□ -1.83
SIX3O95343 IGKV2D-19-201ENST00000523346 262 ntBASIC3.63□□□□□ -1.83
SIX3O95343 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC3.63□□□□□ -1.83
SIX3O95343 PTS-202ENST00000524931 696 ntTSL 3 BASIC3.63□□□□□ -1.83
SIX3O95343 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
SIX3O95343 SNRPGP16-201ENST00000533275 226 ntBASIC3.63□□□□□ -1.83
SIX3O95343 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC3.63□□□□□ -1.83
SIX3O95343 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC3.63□□□□□ -1.83
SIX3O95343 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC3.63□□□□□ -1.83
SIX3O95343 FAM60BP-201ENST00000578364 658 ntBASIC3.63□□□□□ -1.83
SIX3O95343 AC022662.1-201ENST00000580252 331 ntBASIC3.63□□□□□ -1.83
SIX3O95343 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC3.63□□□□□ -1.83
SIX3O95343 KLKP1-201ENST00000595979 403 ntBASIC3.63□□□□□ -1.83
SIX3O95343 BBIP1P1-201ENST00000602999 279 ntBASIC3.63□□□□□ -1.83
SIX3O95343 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC3.63□□□□□ -1.83
SIX3O95343 AC116312.1-201ENST00000606841 314 ntBASIC3.63□□□□□ -1.83
SIX3O95343 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.63□□□□□ -1.83
SIX3O95343 AC103710.3-201ENST00000608157 948 ntBASIC3.63□□□□□ -1.83
SIX3O95343 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC3.63□□□□□ -1.83
SIX3O95343 AC107075.1-201ENST00000613695 314 ntBASIC3.63□□□□□ -1.83
SIX3O95343 AC006213.4-201ENST00000616184 634 ntBASIC3.63□□□□□ -1.83
SIX3O95343 AC012314.7-201ENST00000619693 93 ntBASIC3.63□□□□□ -1.83
SIX3O95343 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC3.63□□□□□ -1.83
SIX3O95343 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
SIX3O95343 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC3.63□□□□□ -1.83
SIX3O95343 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.63□□□□□ -1.83
SIX3O95343 ANKRD62P1-201ENST00000434304 1623 ntBASIC3.62□□□□□ -1.83
SIX3O95343 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
SIX3O95343 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
SIX3O95343 MAPK10-372ENST00000641954 3413 ntBASIC3.62□□□□□ -1.83
SIX3O95343 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
SIX3O95343 RNU6-283P-201ENST00000364788 107 ntBASIC3.62□□□□□ -1.83
SIX3O95343 CYCSP45-201ENST00000402289 315 ntBASIC3.62□□□□□ -1.83
SIX3O95343 MIR1284-201ENST00000408337 120 ntBASIC3.62□□□□□ -1.83
SIX3O95343 RNU2-47P-201ENST00000410649 186 ntBASIC3.62□□□□□ -1.83
SIX3O95343 RHEBP3-201ENST00000411920 351 ntBASIC3.62□□□□□ -1.83
SIX3O95343 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC3.62□□□□□ -1.83
SIX3O95343 MTCO2P5-201ENST00000422621 426 ntBASIC3.62□□□□□ -1.83
SIX3O95343 AL139421.1-201ENST00000423010 169 ntBASIC3.62□□□□□ -1.83
SIX3O95343 RPL7P2-201ENST00000427639 268 ntBASIC3.62□□□□□ -1.83
SIX3O95343 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC3.62□□□□□ -1.83
SIX3O95343 AL365396.1-201ENST00000430854 671 ntBASIC3.62□□□□□ -1.83
SIX3O95343 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC3.62□□□□□ -1.83
SIX3O95343 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC3.62□□□□□ -1.83
SIX3O95343 AL445669.2-201ENST00000454425 421 ntBASIC3.62□□□□□ -1.83
SIX3O95343 NECAP1P2-201ENST00000455668 727 ntBASIC3.62□□□□□ -1.83
SIX3O95343 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC3.62□□□□□ -1.83
SIX3O95343 AP001992.1-205ENST00000462248 379 ntBASIC3.62□□□□□ -1.83
SIX3O95343 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC3.62□□□□□ -1.83
SIX3O95343 ACTG1P13-201ENST00000486987 1043 ntBASIC3.62□□□□□ -1.83
SIX3O95343 RPL7P38-201ENST00000488396 739 ntBASIC3.62□□□□□ -1.83
SIX3O95343 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC3.62□□□□□ -1.83
SIX3O95343 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC3.62□□□□□ -1.83
SIX3O95343 AC093278.1-201ENST00000494700 600 ntBASIC3.62□□□□□ -1.83
SIX3O95343 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC3.62□□□□□ -1.83
SIX3O95343 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC3.62□□□□□ -1.83
SIX3O95343 AC093853.1-201ENST00000515689 483 ntBASIC3.62□□□□□ -1.83
SIX3O95343 RNA5SP164-201ENST00000516533 110 ntBASIC3.62□□□□□ -1.83
SIX3O95343 HSPA8P13-201ENST00000523715 472 ntBASIC3.62□□□□□ -1.83
SIX3O95343 OR5AP1P-201ENST00000529730 940 ntBASIC3.62□□□□□ -1.83
SIX3O95343 AC018630.1-201ENST00000541376 925 ntBASIC3.62□□□□□ -1.83
SIX3O95343 CR383656.7-201ENST00000548164 174 ntBASIC3.62□□□□□ -1.83
SIX3O95343 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC3.62□□□□□ -1.83
SIX3O95343 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC3.62□□□□□ -1.83
SIX3O95343 AL163642.2-201ENST00000604722 1019 ntBASIC3.62□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 76.2 ms